Ctenopharyngodon idella (grass carp): 127524968
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Entry
127524968 CDS
T08802
Name
(RefSeq) neuronal PAS domain-containing protein 4-like
KO
K26457
neuronal PAS domain-containing protein 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127524968
Transcription factors [BR:
cide03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127524968
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_11
PAS_3
PAS
PAS_9
PAS_4
PAS_2
Motif
Other DBs
NCBI-GeneID:
127524968
NCBI-ProteinID:
XP_051773028
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All DBs
Position
13:complement(24955065..24960111)
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AA seq
574 aa
AA seq
DB search
MSVSCDTSIRRSLRASKRFRSTKGASKARRDHINAEIRTMRALLPIGAEEQERLSYLHSM
SLICTFIRKTVLLTGVHEDGSDVSPLNESFLQALPGFIVALNKDGKLVYVSENVAEYLGL
SMVDVLQGDTFYDMMDGRDAEALKLVLRDPDVSAERSFVCRMLTSKAFRLQYGSCCSMLV
KGRFQSSSLFVALCTPTADRLQDRQLLHASGSFHTLHRPDMSLTHAPYSVLFHLGFSAEE
LIGRSWYDLLHPDDLTLAARCHTTLIRDEGDTSAEMLVRLQRKDLSWIWLYVCATAKAAK
ESIACTNHVISETEAIYLKDKLYGSVSPSVCGAQVSQGPVCLPEMAGQIPSRSRRSSETG
DVQIRSFFSTPPYSPTSSHSSDFLSEGYGSFEHLVCGSRFCPSEVFPVSQPYPDAPPNVG
LPDAHRVPVYQPVLDASEGPSDCVLHQEDFMFAQDSVPSLLTPEPSPSADGRFLFSQTEQ
VEVGTLAHQIRSLASSFSRHTQHDGTLCWTPEPLLDERVIDSILRDLDAASAKNTDCVWN
GLPVAPVAVEPFISATHTNTELHQLHHCLYAGIH
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcagctgcgacacgagcatcagacggagcctccgcgcctctaaacgcttcagg
tccactaaaggggcgtccaaagcccggcgagaccacatcaatgccgagatccggactatg
cgggcgctgctgcccatcggtgctgaagagcaggagcgtctgtcgtacctgcactccatg
tcgctcatctgcaccttcatcaggaagactgtgctgctcacaggtgttcatgaggacggc
agcgatgtttctcctctgaacgagagctttctgcaagccttgcctgggtttattgttgct
ttgaacaaagacggaaaactggtgtacgtgtctgaaaacgtggcagaatatctcggcctg
tcaatggtcgatgtccttcagggagacactttctatgatatgatggacggtcgcgacgct
gaagcgctgaagctcgttttgagagatccggacgtctcagcagagaggagtttcgtgtgc
cgtatgctcacctccaaagccttccggctccagtacggcagctgctgctccatgctggtg
aagggacgcttccagagctcctctctgtttgtggcgctctgtacgcccacggccgacaga
ctgcaagaccgccagctcctccacgcctccggctccttccacacgctccaccggcctgac
atgagcctcactcacgccccctacagtgttttgttccacctgggtttctcagcagaggag
ctgattggtcgatcgtggtacgacctcctgcaccctgatgacctcacgctcgccgcccgc
tgccacacgacactcatacgagatgaaggcgacacaagtgcagagatgctggtcagactg
cagcggaaggatctgtcgtggatctggctctacgtttgtgcaactgcgaaagcagccaaa
gaatcgatcgcctgcacaaaccacgtcatcagtgaaacagaagccatctatctcaaagac
aagctctacggcagcgtgtctccgtctgtctgcggtgctcaggtgtctcagggtcccgtc
tgcttgccggagatggcaggacagatcccgagcagaagcaggaggagctcagagacgggc
gatgtgcagatcagaagcttcttctccacgccgccctacagccccacttcctctcactct
tctgacttcctgtctgaaggctatggctcttttgagcacttggtgtgcggctcacgcttc
tgcccttctgaagtattcccagtgtctcagccgtaccctgacgctcctcctaatgtaggt
ctgcccgacgctcaccgcgtccccgtgtaccagccggtgctggacgcgagcgagggcccg
tcagactgtgtcctgcatcaggaggacttcatgtttgctcaggacagcgtgccgagtctg
ctgacgccggagccctcaccctcagcagacggacgcttcctcttcagccagacggagcag
gtggaggtcggaacgctggcccatcagatccgctctctggccagcagcttcagtcgacac
acacagcacgatggcaccctctgctggacgcctgagccgctgctggacgagagagtcatc
gacagcatcctgcgcgatctggacgcggcctcggccaaaaacacggactgcgtgtggaac
gggctcccggtggctcccgtggctgtggagccgttcatcagcgcgacacacaccaacacc
gagttgcatcaactccatcactgtctgtacgccggcatccattaa
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