Ctenopharyngodon idella (grass carp): 127525012
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Entry
127525012 CDS
T08802
Name
(RefSeq) toll-like receptor 4
KO
K10160
toll-like receptor 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04145
Phagosome
cide04217
Necroptosis
cide04620
Toll-like receptor signaling pathway
cide04621
NOD-like receptor signaling pathway
cide05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127525012
09143 Cell growth and death
04217 Necroptosis
127525012
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127525012
04621 NOD-like receptor signaling pathway
127525012
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127525012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127525012
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cide04054
]
127525012
04090 CD molecules [BR:
cide04090
]
127525012
00536 Glycosaminoglycan binding proteins [BR:
cide00536
]
127525012
Membrane trafficking [BR:
cide04131
]
Endocytosis
Phagocytosis
Toll-like receptors
127525012
Pattern recognition receptors [BR:
cide04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
127525012
CD molecules [BR:
cide04090
]
Proteins
127525012
Glycosaminoglycan binding proteins [BR:
cide00536
]
Hyaluronan
Cell surface receptors
127525012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_NXF1-5
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
127525012
NCBI-ProteinID:
XP_051773149
LinkDB
All DBs
Position
13:22831601..22833387
Genome browser
AA seq
481 aa
AA seq
DB search
MNNLTKLQELRVGTNNIQSVSLPPFMSSFKDFSLLDLHANNISIIKTDHTVVLRTIGRNM
TLILSRNPLLYIEPGAFKDVYLRQLDIRSAFVSFAAQKFGLKALYGLNVKRLMFGKYRDD
FRFQFSDTDFLDVFCSITFQEVYYYIMESPEFISSFRCMINATKVVVVGGLIDETEHVLF
HEIKELYLIHNHLGSLPGKQLSHLHTLEKLIITHNTEPICDEGFSDMPKLKYMDLSSNQI
KLKRCCATLLSGTPQIRYLNLSLNAEIDLDVGAFVGLYSLEILDFHHTKVLRVGYLSVFS
NLKYLRYLDVSYSSIIFTNIYCFYGLSSLNVLKIAGNNFQGDVVRYLFNNLTVLEHLDMS
YCRMVEVHSSSFKNLQRLRLLNLRGNKLMTIDFLTHSNLKQLTSFYVDKNSITSIPLDVL
QKLPTNLSEFDLSSNPIDCSCSQTVFILWIIQNQNILKQPENIFCKSFSLSSGFRAADFG
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaataacctaaccaaactgcaggaacttagagttggaacaaataacatccagtccgtg
tctctccctccattcatgagctcctttaaagatttcagtttacttgatctacatgccaat
aatatatccatcatcaaaactgatcacacagttgtgttgcgaacgattggcagaaacatg
actttgattctctctaggaatccattattatacattgaaccaggagctttcaaagatgtt
tatctcagacagctggatatccgatctgcctttgtttcatttgctgctcagaaatttggt
cttaaagctctatatggtcttaatgtcaaaaggctgatgtttggaaagtacagggatgat
ttcagatttcagttctcagatactgactttttagatgtcttttgctccattacttttcag
gaggtatattattacattatggaaagtcctgagttcatttctagctttcgctgtatgatt
aatgccacaaaggtagtagtagtgggaggtttaattgatgaaacggagcatgtgcttttt
catgaaatcaaggagctttacttgattcacaatcacttgggttctttgccaggtaaacaa
ctgtcacatctccatactttagaaaaactaataattacacacaacactgaaccaatttgt
gatgaaggctttagtgatatgcctaagcttaaatatatggatttgagctctaaccagatt
aaattaaaacgatgctgtgcaacacttttatctggcacccctcaaatcaggtatttgaat
ttaagtctaaatgcagaaattgatcttgatgtaggagcatttgttggactttattccctt
gagattctagatttccatcatacaaaggttttacgtgtcggatacctttcagttttctct
aacttaaagtatttgaggtatctggatgtttcttattcaagtatcatctttactaacata
tattgcttttatggactgagcagtcttaatgttctcaagatagctggcaataattttcag
ggtgatgtagtaagatatttatttaacaatctcacagttctagagcaccttgacatgtca
tactgtcgtatggtagaggtacactcgagctcttttaaaaatcttcaaaggcttagactt
ttgaatctcagaggaaacaaattaatgactatagattttcttacccactcaaacctgaaa
caattaacatcattttatgttgataaaaacagcattactagcatcccacttgatgttctc
caaaagctgccaacaaacctttcagagtttgatttgtcctccaaccccatcgattgctcc
tgttcccagacagtttttattttgtggattatccaaaatcagaacattttgaagcaacca
gaaaatattttctgtaaatctttttcactaagctcaggttttagagcagcagactttggg
tcatga
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