Ctenopharyngodon idella (grass carp): 127525021
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Entry
127525021 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cide03009
]
127525021
Ribosome biogenesis [BR:
cide03009
]
Eukaryotic type
90S particles
Other 90S particles
127525021
Pre-60S particles
Other pre-60S particles
127525021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
DUF6031
DUF7515
Motif
Other DBs
NCBI-GeneID:
127525021
NCBI-ProteinID:
XP_051773159
LinkDB
All DBs
Position
13:complement(13084757..13098552)
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AA seq
1281 aa
AA seq
DB search
MVKSGKLKSGAAQKIRRWKKGHSSDSNPETCRYRKAARSRYFSRPSEKSDLTVDALKLHN
ELQSGSLQRSGDVAGDAMEDQALTEKTSGTFLSGLSDCSNLTFRKVQRYWESNSAAHKEI
CAVLAAVTEVLRSQGGKETETEYFAALMTTLEAVDSSESLAAVAYLLNLVMKRVPAAVLK
KKFSDTAKAFMDVMSNQANSDSLSCLRWILSCLATLLRKQDLSVWSYPSTLQVYHGLLVF
TVHSKPKVRKAAQQGVCSILRYSDFMFSDNAPSHHPAAVTTAKFCCKELEQSGGSKEDTT
TLHVLGLLKDLLSAFPLNSVKSCCETLLRVMTLSHVLVTANAMQAFHKLFISKPSPSSMS
AELNAQIITALYDYVPSENDLQPLLAWLAVMEKAHVHLSSLQSALSLGHLPRLFSVAMSC
LLSPHTQVVSAATQTLKTLINECVAARMAEIEPVITNTSTGNGACILKMFHIVEEGLSYR
FHASWPFVLQILGCFYRAAGKQAHPFMIKSLQSLSDLRATPQFPFSGELDLAVGSAVESM
GPEVVLNAVPLLITGTDDDLEFPRSWLIPVIRDHVKNTQLAYFTSHFFPLANKLKQSADE
LEQSGQKLMAKVYQTLQMQIWTMLPGFCTKPTDLLASFKNIARPLGMALNDRPDLRLCIC
QALRTLINKSCETEEEKAELNRFSKNFLPILFNVYSQQPKPGEMASARMAVLETVRVYLT
ITDQKMACTFLHKALERLNSADNSEFTRLAVIDLIVAMAPFVDEPSMTQTFELIKPFVES
KDAGIQKKAYRVLEEMCGGERESCKAFVLANLEQLKGILLDSLTSAASPAKRPRLKCLIH
IVKQINEEHHDFITALLPEVILCTKEMSVGARKNAYSLLVEIGNAFLRFCGNTKDAINEY
LGHVYIGLTGSVTMITCTVLALTRLVFHYKDSIDVSSLEQLLHNVCLLLGSRTRDIVKAS
LGFLKVLLFSLDVKVLASHVNVIMEGISNMNDMRRHFRVKLKSIYTKLIRKFGFELVKSM
LPTDQHKVLVNIRKTEARNKRRKLVIKTEEDDSDSEDETPKVKGESIEDILAETDSADSD
EDEKPKKGLKKPMKGQAWLKEGVSDEPLNFLDPKAAQRVLATNPNLKKXTRAEHGFKVTS
DGRLIIKEEDDDDIDDKTKDAEMDDVLEEAGVKTRKNPKWKMHDDLDDDMDVKPTKYKAG
GIGIHRPLGARPEFGKEYKSKKGKGDVKKEGKCDPYAYVPLKKSQLNRRKKAKLQGQFKG
MVRGAKKGALSGTRILKKRKA
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtctggaaaacttaagtctggagcagcccagaaaataaggcggtggaagaaa
gggcacagtagtgatagcaatccggagacatgtcgctatcgaaaagccgcgaggagccga
tatttcagccgtccctcagaaaaaagtgatctgacagtagatgccttgaaactccacaat
gagcttcagtcaggatctttgcagagaagcggtgatgtggcaggagatgccatggaagat
caagccctcacagagaaaacctctgggacttttcttagtggactgtcggactgctccaac
ctcacttttagaaaagtacagcgctactgggagtcaaactctgcagcacataaagagatc
tgtgctgtattggcagccgtaactgaagtgcttcgctctcaaggaggaaaggagacagag
acagagtactttgcagccttgatgacgacacttgaggctgtagatagcagcgaatcactg
gcagctgttgcatacctccttaacttggtcatgaaaagggtgccggctgcagtgcttaag
aaaaagttctcggacacagccaaagccttcatggatgtgatgtcaaaccaagccaattct
gactctttatcctgccttcgatggatcttatcctgtctggcgactttgctgcgtaaacag
gatctgtcagtgtggagttacccatcaactctacaggtgtaccatggcctgctggtcttc
acagtacactctaaaccaaaggtgcgaaaggcagcacagcagggcgtttgctccatcctt
cgctacagcgacttcatgttctcagataatgccccaagccaccacccagcagccgtcacc
acagccaaattctgctgcaaagaactggagcagtcaggaggcagcaaagaagacacaacc
actctccatgtgctgggtcttctgaaggacctgctgtctgcattccccctgaactcagtc
aagtcttgctgtgagacccttctccgtgtcatgaccctgagccatgtgctggtgaccgca
aatgcaatgcaggctttccacaagctcttcattagcaaacccagtccttccagtatgtct
gcagagctcaatgcccagatcatcacagctttatatgactatgttcctagtgagaatgat
ctgcagcctttactagcatggcttgctgtaatggaaaaggcccatgtacatctctctagt
ttacagagcgctctgagtctcggtcatcttcctcgcctcttctcggtcgccatgtcgtgt
cttctatccccgcacacgcaagttgtctctgctgcaacccagactctgaagactctgata
aatgagtgtgtagctgctcgtatggcagagattgaacccgttataacaaacacatcaact
ggaaatggggcttgcatcctgaagatgtttcatattgtggaggaagggttgtcctatcgt
tttcatgcctcttggccgtttgtgctgcagatcctgggctgcttctaccgagctgcagga
aaacaggctcatcctttcatgataaagagtttgcagtctctcagtgacctgcgggccacc
cctcagttccccttctctggggagttggatctggctgtgggcagtgcggtggagagcatg
ggtccagaagtggttctgaacgctgtgcccctcctcatcactggaacagatgatgacctt
gagttcccgcgcagctggctgatcccggtcataagagatcatgtgaagaacactcagctg
gcttacttcacatcacactttttccctttggcaaacaaacttaaacagtcagctgatgaa
ctggagcagtcaggacagaagctgatggcaaaagtgtatcagactctacagatgcagata
tggactatgctgcctggattctgcactaaacccaccgatctgttggcatcattcaagaac
attgctcggcctctgggtatggccctcaatgatcgccctgacctccgcctgtgcatctgt
caggccttgcggactctcatcaacaagagctgtgagacagaggaagagaaggctgaatta
aatcgcttctccaagaactttcttcccatcctgtttaatgtctatagtcagcagcctaaa
ccaggagagatggcatctgctaggatggctgtcctggagacagtcagagtttacctcacc
atcacagaccagaagatggcgtgcacgttcctgcacaaagccttggagagactcaacagt
gcggacaactctgagttcacacggcttgcagttattgacctgattgttgcaatggctcca
tttgtggatgaaccatctatgacccagacatttgaattgattaaaccttttgtggagagc
aaggatgctggaatccagaaaaaagcctatagagtgctggaggagatgtgtggaggggag
agagaatcttgtaaggcttttgttctggcgaatcttgagcagctgaagggaatactgcta
gacagcctgacgtctgcggcttcacctgccaaacggccaagactcaagtgtctgattcac
atagtgaagcagatcaatgaagaacaccatgatttcattactgctctgcttcctgaggtc
attctttgcacaaaggaaatgtctgtcggtgcccgcaaaaatgcctactctcttctggtt
gagattggaaatgcatttttgcggttttgtgggaacacaaaagatgccataaatgagtat
ttaggccatgtgtacattggacttactggctctgtaacgatgatcacctgcacagttctt
gccttaaccaggctagtgttccattacaaagattccatagacgtgtcctcattggagcag
ctgctacataatgtctgtcttctgcttggcagcaggacacgagacattgtcaaggcctct
cttggcttcctaaaagttctcctgttttctctagatgtcaaggttttagccagccatgtt
aatgttattatggaaggtatcagcaatatgaatgatatgcgaagacactttagggtgaaa
cttaagagtatttacaccaaactgattaggaaatttggatttgagctggtcaaaagcatg
ttgccaaccgatcaacacaaggtcctagtgaatatccgtaaaacggaggccagaaataag
agacgcaaactcgtgatcaagactgaagaggacgattcagacagtgaggacgagacgcct
aaagtgaaaggagagagtattgaggacattctggctgagaccgactctgctgactcggat
gaagacgagaaacccaagaaggggctgaagaagccaatgaagggccaggcctggttaaag
gaaggtgtgtccgacgaaccactcaacttcctcgatccaaaagcagcgcagagagttctg
gccaccaaccctaacctcaagaagnctaccagagcagagcatggattcaaggtgacatcc
gatggtcgattgatcataaaagaagaggatgatgatgatattgatgacaaaactaaagat
gctgaaatggatgatgtactcgaagaggcgggagtcaaaactagaaagaatccgaagtgg
aaaatgcatgacgatctagatgatgacatggatgtcaaacctacgaaatataaagctggt
ggcattggaatccacaggcctctgggtgcacgaccagagtttgggaaagagtataaatct
aagaagggaaaaggggatgttaagaaggaaggcaagtgtgacccgtatgcttacgttcct
ctgaagaagtcccagctcaatcgcaggaaaaaggccaaactccaaggccagttcaaaggc
atggtcagaggggccaagaaaggagcactctctggaacgagaatactgaagaagaggaaa
gcctaa
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