Ctenopharyngodon idella (grass carp): 127525100
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Entry
127525100 CDS
T08802
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127525100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cide03009
]
127525100
Ribosome biogenesis [BR:
cide03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
127525100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_2
AAA_14
AAA_33
TIP49
NPHP3_N
AAA_28
Mg_chelatase
RNA_helicase
AAA_17
AAA_18
Rad17
nSTAND3
TsaE
ABC_tran
Viral_helicase1
IstB_IS21
Vps4_C
Zeta_toxin
NACHT
NB-ARC
AAA_3
Sigma54_activ_2
DUF815
Motif
Other DBs
NCBI-GeneID:
127525100
NCBI-ProteinID:
XP_051773309
LinkDB
All DBs
Position
13:30436536..30456206
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AA seq
821 aa
AA seq
DB search
MKNRSAYNIDPRLKHRVHQYLKTHNDPYVDISAMASELQQQFRIEYGRRNRTAFRIQVEK
VHAAICSESDISLLENKHLAKRARRSREDGDNSHVTEYSTDSEDDIPEHEHTNHMNSSLT
SLYQRGASHAAGGSTPQKSDSDGWIIDKTGNKGQENICIDLCEEESTSAANTNEDLFDEL
RGHLIHTHAATSRSGKKQRDPSKEKKSKSGKQRGVKKSKHDEDAEISAAILTKKSKVKVH
ELQYSTVKFEDFGGSEETLEEVCKLLIHMRHPEVYQRLGVVPPRGFLLHGPPGCGKTLLA
QAVAGETGLPMLKVSAPELVSGVSGESEQKLRELFEQAISSAPCIMFIDEIDAITPKREI
ASKDMERRIVAQLLTCMDDLNSLSEPAQVLVIGATNRPDSLDPALRRAGRFDREICLGIP
DEGARLKILKTLCRKITLPEDFDYRQLARLTPGYVGADLMALCREAAMTAVNRILLKSSS
EDGTPPKGELEQLLALLKTNESLNEEQLSGLCVVMSDFKTSLARVQPSAKREGFATVPDV
TWEDVGALQDIREELNMAIMAPIHNPEHFKALGLNAPAGVLLAGPPGCGKTLLAKAVANE
SGLNFISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSEHESGAS
VRVVNQLLTEMDGMENRRQVFMMAATNRPDIIDPAVLRPGRLDKTLYVGLPPAADRHAIL
VTITKGGTRPHLDSDVSLEEIAHDARCESFTGADLSALVREASVNALRVHLNAGPAQTHT
EPVKDIRVSRVHFEEAFKKVRPSVSKKEQLMYEKLKDTLTR
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccgcagcgcttataatatagacccgagactcaaacacagagtccatcagtac
ctgaaaacacacaatgatccgtatgtggacatttcagccatggcctctgagcttcagcag
cagttcaggattgagtacggccggaggaacaggacagccttcaggattcaagtggaaaaa
gttcatgcagccatatgcagtgagtctgacatctctcttctggaaaacaaacatctggcc
aaaagagcgagacgcagccgagaggacggggacaacagtcacgtcaccgaatacagcact
gacagtgaggacgatattcctgaacatgaacacacaaatcacatgaacagctcgctgacg
tcgctctaccagagaggagcgtctcacgcggccggcggctcgacccctcagaagagcgac
agcgacggctggatcatcgataagactggaaacaaaggacaggagaacatctgcattgat
ctgtgtgaggaagagtccaccagcgctgcgaacacaaatgaagatctttttgatgaactc
cgagggcatctgatccacacacatgcagcaacgtcaaggtccggaaagaagcagagagat
ccatcgaaggaaaagaaatcaaagagcgggaagcagaggggagtgaagaagagcaagcat
gacgaggacgcggagatcagtgctgcaatactgacgaaaaagagtaaggtcaaggtccat
gagcttcagtactccactgtgaagtttgaggatttcggcggcagcgaggaaactctggag
gaagtgtgtaaactgctgatccacatgagacatccagaagtgtaccagcggctgggagtc
gttcctccgcgaggattcctcttgcacgggccgccgggatgtgggaagacgctgctggct
caagccgtggctggagagactggtttgcccatgctgaaggtctcagcgccggagctggtg
tctggagtctctggagaatctgagcagaagctgcgggagctgtttgagcaagccataagc
agcgctccctgtatcatgttcatcgatgagattgatgccatcactccaaaacgagagatc
gcctccaaagacatggagagaaggatcgttgctcagttactcacctgcatggatgacctc
aattcgttatcagagccagctcaggtcttggttattggagccactaaccgtccggactca
ttggatccggccctgcgtcgagccggcaggtttgaccgagagatctgtctggggattcct
gatgagggcgcacgactgaagattctgaagacactctgtcggaagatcacgctgccggag
gattttgactacagacagttggcgcgtctcacaccaggttatgtgggcgcagatttaatg
gcgctgtgccgtgaggcggccatgacagccgtcaacagaatcctgctgaagtcgagcagt
gaagacggcactccaccgaaaggtgagctggagcagctgctggcattgctaaagacgaac
gagtctctgaacgaggagcagctttctggactctgcgttgtcatgtcagacttcaagacg
tcgttagccagagtccagccatccgctaagcgtgagggctttgccaccgtaccggacgtg
acctgggaagacgtgggcgccctgcaggacatccgcgaggagctcaacatggccatcatg
gctcccatccataacccggagcatttcaaagctctgggtctcaatgccccagctggagtg
ctgctcgccggaccgcccgggtgtggaaagaccctcttagccaaagctgttgctaatgag
tctggcttgaacttcatctctgtcaagggtccagagctgctgaatatgtatgtaggcgag
agcgagagagccgtccggcaggtcttccagagaggccgtaactcagcgccgtgtgtcatc
ttttttgatgagattgatgctctttgtcctcgtcgctcagagcatgagtcaggagccagc
gttcgtgtggtaaaccagctgctcactgagatggacggcatggagaatcgccggcaggtt
ttcatgatggctgccaccaacagaccagatattattgatccggctgtgctcagaccggga
cgactggacaaaactctgtatgtgggtttgccgcccgccgcagacagacacgccatatta
gtcaccattactaagggtggcaccagaccacatctagactctgatgtcagtcttgaggaa
attgcccatgatgcacgttgtgaaagttttacaggtgcagatctgtcggcgctggtgcga
gaggcgagtgttaacgctctgagagttcacctgaatgcaggaccagcgcaaacacacaca
gagccagtgaaggacatcagagtgagccgggttcacttcgaggaggccttcaagaaggtg
cgaccgtctgtgtccaagaaggagcagttaatgtatgaaaaactgaaggataccctcaca
agatga
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