Ctenopharyngodon idella (grass carp): 127525106
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Entry
127525106 CDS
T08802
Name
(RefSeq) paired box protein Pax-2a isoform X1
KO
K15608
paired box protein 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127525106
04131 Membrane trafficking [BR:
cide04131
]
127525106
03036 Chromosome and associated proteins [BR:
cide03036
]
127525106
Transcription factors [BR:
cide03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
127525106
Membrane trafficking [BR:
cide04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
127525106
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
127525106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
Homeodomain
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
127525106
NCBI-ProteinID:
XP_051773315
LinkDB
All DBs
Position
13:12142843..12171125
Genome browser
AA seq
519 aa
AA seq
DB search
MDIHCKADPFSAMHLSHIGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQ
LRVSHGCVSKILGSYQKDLIRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMF
AWEIRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQPFHPSSDGTGTPLTTAGHTIGDLES
TPYTLTYSCALSVPSTASPPVSSASNDPVGSYSINGILGIPRSNGEKRKRDDVLWSGNHL
DGRKIGYYGSDGSGPNSDSQGSVESLRKHLRADAFTQQQLEALDRVFERPSYPDVFPTSE
HIKPEQANEYSLPALNPGLDEVKPSLSTSVSSDLGSSVSQSYPVVTESHSSSACVKQEPH
EASLAPFTPSSLAVSGLAELLPLQPSVSVDASTPCYGAYAHHAPSYSQYASQPIIAGRDM
ASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSDFSGNPYSHPQYTTYNEAWRFSNPALLM
PHPGAPPLPLLPLPMTATSYHGNPIKLQDHGRGLHIVPV
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaagcagaccccttctcggcgatgcacctatcccatatagggcac
ggcggtgtgaaccagctaggaggggtgtttgtgaatggcagacccctacctgacgtggtc
aggcaaagaatcgtggagctcgcgcaccaaggagtcagaccttgtgacatctcaagacaa
ctacgggtcagccatggctgtgtcagcaaaattctcggaagctatcaaaaggatcttata
agatattatgaaaccggcagtattaaacctggagttattggggggtccaaaccaaaagtg
gcgacgcccaaagttgtggataaaatcgcagaatacaagcggcagaatcccacaatgttc
gcttgggagatcagggaccgactcctggccgagggcgtttgtgacaacgacacagtacca
agtgtttcatctataaacaggataattcgaaccaaagttcagcagcctttccacccatcc
tccgacggcacaggaacgcctctcaccacagcgggacacactataggtgatcttgagagc
actccatatacgttaacctattcctgtgctctttcagtgcccagcacagcctccccacct
gtgtcaagcgcttccaatgaccccgtggggtcctactctattaatggcatcctaggaatc
cctcgctccaacggcgaaaagagaaaacgcgatgatgttctctggagtggcaaccacttg
gatgggaggaaaataggatattatggttcagatggctctggcccaaacagtgattctcag
ggtagtgtggagagtttacggaagcacctgagggccgatgccttcactcaacaacagctg
gaggctctggatcgggtgtttgagcggccgtcataccccgacgtcttccctacgtcagaa
cacatcaagccagagcaggctaatgaatactcgctaccagcactgaaccctggactggac
gaagtcaagcccagtctgtcaaccagcgtcagctcagatttgggctccagcgtgtcacag
agctacccggtagtgacagagtcacattcatcctccgcgtgtgttaagcaggagccgcat
gaggcttccctggctcctttcaccccttcctcactggcagtctcgggcctagcggaactg
ttgcccctccagcccagcgtgtcagtagatgcctccaccccctgctacggtgcctatgcc
catcatgcccccagctacagccagtatgcaagccagcctattatagcaggtcgagacatg
gcaagcacaaccctaccagggtacccacctcacgttccccctactgggcagggcagctac
cccacctctacacttgctggaatggtccctggaagcgacttttcaggaaatccctactct
cacccgcagtacacaacttacaatgaagcttggcggttcagcaaccccgcgttattaatg
ccgcatcccggggctccgcccctcccactgctgccactgcctatgaccgccactagttac
catggcaacccaatcaaactgcaggaccatggccgcggcctccatatcgtaccagtctga
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integrated database retrieval system
