Ctenopharyngodon idella (grass carp): 127525134
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Entry
127525134 CDS
T08802
Name
(RefSeq) protein jagged-1b
KO
K06052
jagged-1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04330
Notch signaling pathway
cide04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127525134
04371 Apelin signaling pathway
127525134
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cide04090
]
127525134
CD molecules [BR:
cide04090
]
Proteins
127525134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
EGF_2
EGF_DL_JAG
DSL
JAG1-like_EGF2
EGF_CA
EGF_Teneurin
EGF_3
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
127525134
NCBI-ProteinID:
XP_051773403
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Position
13:15748226..15782764
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AA seq
1213 aa
AA seq
DB search
MIVRRSSVFSAFYLHAFLLCLPTKVSDASGHFELEIVSMQNANGELQNGSCCDGARNPAD
RKCTRDECDTYFKVCLKEYQSRVSAAGACSFGTGSTPVLGGNKFSTKGTRSEKSRIVLPF
SFAWPRSYTLIVEALDFNNETASESGKLIEKASHSGMINPNRQWQKLSHNGPVAQFEYQI
RVTCDEHYYGFGCNKFCRPRDEFFGHYTCDQNGNKTCLEGWTGPECNTAICRQGCSTEHG
SCKQPGGCKCLYGWQGLYCDKCIPHPGCVHGTCNEPWQCLCDTNWGGQLCDKDLNYCGTH
QPCLNGGTCSNTGPDKYHCSCEDGYSGVNCERAEHACLSNPCANGGTCKETSQGYECQCA
VGWSGPSCEINVDDCTPNPCKHGGTCQDLVNGFKCTCPSHWTGKMCLIDANECEDKPCVN
AKSCHNLIGGYFCECLPGWMGQNCDININDCQGQCLNGGTCKDLVNGYRCLCPPGYSGEH
CEKDVDECASSPCLNGGRCQDEANGFQCLCPAGFSGQLCQLDIDYCQPNPCQNGAQCFNL
ASDYFCKCPDDYEGKNCSHLKDHCRTTSCQVIDSCTVAVASNSTPDGLRYISSNVCGPHG
RCRSQAGGQFTCECQEGFRGTYCHENINDCESNPCRNGGTCIDKVNVYQCICADGWEGVH
CEINIDDCSLNPCLNKGACQDLVNDFYCECRNGWKGKTCHSRDSQCDEATCNNGGTCHDE
GDIFKCRCSPGWEGATCNIAKNSSCLPNPCENGGTCVVNGDSFNCVCKEGWEGSTCTENT
NDCNPHPCYNSGTCVDGENWYRCECAPGFAGPDCRININECQSSPCAFGSTCIDEINGYR
CLCPPGRSGPECQEVIGRTCIANGQVTADGSKWEENCNLCQCQNGKIHCTMMWCGPKSCP
AEKTRGGCPAGQSCVPIKEEHCFVKPCRSLGECWPPAPPPPSKCHASFSYQDDSCANITF
TFNKENMPQGLSVERICNELRHWYLLKNLTAEYAVSITCEPSSSASNEIHVSISTEEPRL
DRSPIKDITVQIIDLMSKHNGNSTIIKAITGVRVHQTPSPKTDYLVPLLSSIFIVLWILA
LASAFLWCIHRRRKQNTHSNTTTSATEDNTTNNVREQLNQIKNPIEKHAAHGVAIKDYEG
KNSIIAKIRTHNSEVEEEEMDKHLQKARFTKQPAYTLVEREERAPNKNPNWTNKQDNRDL
ETAQSLNRMEYIV
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgcgacggagttcagtattttctgctttttaccttcatgcctttttgttatgc
ttgccgacgaaggtgtctgacgcatcggggcacttcgagctggaaatcgtatcgatgcag
aatgcgaacggcgagctgcagaacggctcgtgctgcgacggcgcgaggaacccggcggat
cgcaaatgcacgcgggacgaatgtgatacatattttaaagtttgtctgaaggaatatcaa
tcgcgagtttccgcggctggggcttgcagtttcggaactggatctacgcccgttctcggt
gggaataaattttcgaccaagggaacgaggagtgaaaagtcaaggattgttttacccttc
agttttgcgtggccgaggtcctacacgttgatagtagaggccttggacttcaataatgag
accgccagtgaaagtggaaagctcatcgagaaagcgtcccactctggcatgatcaaccca
aatcgacaatggcaaaagctgagccataacggccctgtcgcccagtttgagtaccagatc
cgggtaacctgcgatgaacactactacggctttggatgcaacaagttctgccggccacgt
gacgagttctttggacattacacctgtgaccagaatggcaacaagacctgcctggaaggc
tggacaggtcctgaatgcaacacggctatctgcagacaaggttgcagcaccgaacatgga
tcctgtaagcaaccaggtggctgcaagtgtttgtatggctggcagggtctgtactgtgat
aaatgcatccctcacccgggctgtgtacacgggacctgcaatgaaccctggcagtgcctc
tgtgacactaactggggtggacaactctgtgacaaagatctaaactactgtggaactcac
cagccgtgtctgaatggaggaacgtgcagcaatacagggcctgacaagtaccattgctct
tgtgaagatggctactctggggtcaactgtgaacgagctgaacacgcctgtctgtccaac
ccatgtgcgaatggagggacatgcaaggagaccagtcagggttacgagtgtcaatgtgca
gtcggctggagcggaccatcgtgcgaaataaacgtggacgactgtacgcccaacccatgc
aaacatggaggcacctgtcaggatttggtcaatggctttaaatgtacctgcccttctcac
tggaccggcaaaatgtgtctgattgatgccaatgaatgtgaggacaagccatgtgtgaat
gccaagtcatgccacaatctgattggtggatatttctgcgagtgtctccctggctggatg
ggtcagaattgtgacataaacataaatgactgccagggtcagtgtttgaatggaggaacg
tgcaaggatttggtgaatggttaccgctgtctttgccctcctggttactcgggtgaacac
tgtgagaaggacgtggatgagtgcgctagcagtccctgcctgaacggtggtcggtgtcag
gatgaagccaatggatttcagtgcctgtgtcctgccggcttctcgggtcagctgtgccag
ctggatatcgattactgccagcccaacccatgtcagaacggggcgcagtgtttcaacctg
gcctcggactacttctgcaaatgccccgatgactacgagggtaaaaactgctctcacctg
aaggaccattgtcgaaccacatcatgccaagtgattgacagctgcactgttgccgtggca
tccaacagtacgccagacgggctgcgatatatctcctcaaacgtctgtggccctcacgga
cgctgcagaagccaggctggaggccagtttacctgcgagtgtcaagaaggtttcagaggc
acctactgccatgaaaatataaacgactgtgaaagtaacccatgtcgcaacggtggaact
tgcatcgataaggtgaacgtttatcagtgcatttgtgctgacggttgggaaggagttcac
tgcgaaatcaacatagatgactgcagcttgaacccctgcctgaacaagggagcatgtcaa
gacctggtgaacgatttctactgcgaatgtagaaatggctggaagggaaaaacctgccac
tcccgtgatagccaatgtgatgaagccacatgcaacaatggaggtacatgccatgatgaa
ggggacatcttcaaatgcaggtgctcacctggctgggaaggtgccacatgtaacatagcc
aagaacagcagctgtctgcccaacccatgcgagaacggaggcacctgtgtggtcaacggc
gactccttcaattgcgtctgcaaggaaggctgggaaggatccacctgcaccgagaatacc
aacgactgcaacccacacccatgctacaacagcgggacgtgtgtggatggtgaaaactgg
taccgttgcgagtgtgctccgggtttcgctgggccagactgtcgcataaatataaatgag
tgtcagtcttctccctgtgcatttggttctacctgcatagatgaaatcaatggttaccgc
tgcctttgcccacctggaagatcaggaccagagtgtcaagaagtcattgggagaacctgt
attgctaatggacaagtaactgctgatggcagcaaatgggaggaaaactgcaacctttgc
caatgtcaaaatggaaagattcattgcaccatgatgtggtgtggaccaaagtcatgcccg
gcagaaaagaccagaggtgggtgtcctgctggccaatcctgtgttcccatcaaggaagag
cactgcttcgtcaaaccctgtcgtagtctgggagagtgctggcctcctgcgccccctcca
ccctccaaatgccacgccagcttctcttaccaagacgacagctgcgccaacatcacgttc
acctttaacaaggagaacatgcctcaaggcttgagtgtggaacgtatatgtaatgagctg
aggcactggtacctgctgaagaacctcacggcagagtatgctgtgtccatcacctgtgag
ccatcttcttcagctagcaacgagattcacgttagcatctccacagaagagcccaggttg
gacaggagccctattaaagacattacagttcaaatcattgacttaatgagcaagcataat
ggtaacagcactatcatcaaagccatcaccggcgtacgggttcaccagacaccaagcccc
aaaactgactacttggttcctctgctcagctccatcttcatcgtgctctggatcctcgcc
ctggcctcggccttcctgtggtgcattcaccgccgacggaaacagaacacccacagcaac
acgactacctcagcaacagaggacaataccaccaataacgtgcgtgagcagctcaaccaa
atcaaaaaccccatcgagaaacatgcggcccacggcgtggccataaaagactacgagggg
aagaactccatcattgccaaaattaggacgcataactctgaggtggaggaagaggagatg
gacaaacacctgcagaaagcgcgcttcaccaagcagccggcctacacgctggtggagcgg
gaggagcgcgcgcccaacaaaaacccaaattggactaacaaacaggacaacagagacttg
gagacggcacagagcttaaacaggatggagtatatcgtatag
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