Ctenopharyngodon idella (grass carp): 127525300
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Entry
127525300 CDS
T08802
Name
(RefSeq) neurexin-1a isoform X1
KO
K07377
neurexin
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127525300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127525300
Membrane trafficking [BR:
cide04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
127525300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
3keto-disac_hyd
MtrB
Motif
Other DBs
NCBI-GeneID:
127525300
NCBI-ProteinID:
XP_051773704
LinkDB
All DBs
Position
13:30625821..30723483
Genome browser
AA seq
1474 aa
AA seq
DB search
MILHMRHGAHLLWIGLVVCAVNAGAGLSFTGSEGQWASFPTWNACCESEMSFSVKTKNLK
GLLVYFDDEGFCDFLELHIHKGKLRLSFSIFCAEPADVLSDVFISDNQWHSVTIRRNFKN
TTLIVDREIKWVEVKSKRRDMTVFSHLFLGGIPAESLQLTSDTVKDHAPFMGWITDLKVN
RSEPVVINSAGVNADLCGSDHMCLNGGVCSVVDDEPTCDCSETGYQGKDCSEGLAHLMMG
DQGIEEEYVATFKGSEYFCYDLSLNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLA
LKNGAVSLVINLGSGAFEALVEPVNGKFNDNEWHDVKVTRNLRQHSGIGHAMVTISVDGI
LTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSR
LAFKGDPKMKIHGVVAFKCENVATFDPITFETPESFITLLKWNTKKTGSISFDFRTTEPN
GLLLFNHGKPKQQTKETKSPLTLKVDFFAIEMLDGLLYLLLDMGSGTTKTLAVNKKVNDG
EWYHVDFQRDGKSGTISINTIRTPYQAPGESEILDLDDNLYLGGLPENKADMVFPTEVWT
ALLNYGFVGCIRDLFINGQSKDIRRIAEVQKAAGVKPSCSKEAPKQCLSNPCQNNGICRE
GWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMKVQLSVAMHTEAEDVSLRFRSQRAYG
VLMATTSRDSADTLRLELETSRVRLTVNLDCERINCTTSKGPETLFAGQNLNDNEWHTVR
VIRRGKSLKLSVDDLPTVEGEIPGDHTQLEFHNIETGIITEKRYLPIMPSNFIGHLQSLT
FNGKPYIDLCKNGDIDYCEVNAVIGFKNIIADPVTFKSCSSYMTLSTLQAYYSMHLFFQF
KTTSSDGLILFNSGDGNDFIAVELVKGYLHYVSDLGNGAHLIKGNSNKPLNDNHWHNVII
SKDTNNLHTVKIDTKITTQTTVGAKNLDLKGDLYIGGVPEEMYKDLPKLVHAKEGFQGCL
ASVDLNGRLPDLMSEALACVGQIERGCEGPSTTCQEDSCANQGVCLQQWEGFTCDCSMTT
YGGPLCNDAGTTYIFGRDGGLITYTWPPNERPSTRADRLAMGFSTQLKEAILVRVNSSSG
LGDYLKLHIVKGYVTAIFNVGTDDINIEEKSKFVNDGKYHIVKFTRSGGNATLQVDDLPV
IERYPTGNIDSERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQMTIQIGGWERDHSR
AFQGQMSGFYYNGLKVFNMAVEGDPNIRIEGSVRLVGEAQSSSITPQSSATVHRSETSTS
VMEIITTTTSKHQMKHTTPGEPQQTTDDLLVASAECPSDDEDIDPCEPSSGGLANPTGPV
VKSYPGQSDVFRESSSTTGMVVGIVVAAALCILILLYAMYKYRNRDEGSYHVDESRNYIC
NSAQSNGSVVKEKPMDGTSCVSKSKKNKNKEYYV
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgattcttcacatgcggcacggcgctcatctgctctggatcgggctggtcgtgtgtgct
gtgaacgctggagccgggctcagttttactggttctgagggacagtgggcctcgtttccc
acgtggaacgcttgctgtgagagcgaaatgagcttcagcgtgaaaaccaagaatttgaag
ggacttctggtgtactttgatgacgaaggcttctgcgatttcctcgagctgcacatacac
aaggggaaactcagactgagcttctccattttctgtgccgagcctgctgacgtgctttca
gatgttttcatcagcgacaaccagtggcattcagtcacgattaggaggaacttcaaaaac
accaccctcatcgttgacagggaaataaagtgggtggaagttaaatccaaacgccgggat
atgactgtcttcagtcacttgtttttgggcgggattccagcggagtctttacagctgacg
tcggacactgtgaaagatcatgctccctttatgggctggataacagacttgaaagtgaac
cgttctgagcctgtcgtcattaacagcgccggggtcaacgctgacctctgcggctcagac
cacatgtgcttaaacggaggcgtatgcagtgttgtcgacgacgagcctacatgtgactgc
tccgaaaccggctatcagggaaaagactgcagtgaaggtctggcacacctgatgatgggc
gatcaaggaatagaagaagaatatgtggcgacattcaaaggttcagaatacttctgctat
gacctttctctgaacccgatccaaagcagcagcgatgaaatcacactgtcgttcaaaacg
cttcagagaaacggactgatgctccacacgggaaaatctgctgactatgtcaacctggcg
ctgaaaaacggggcggtgtctcttgtcataaatttgggttccggggcgtttgaagctctg
gtggagccggtcaatgggaaatttaatgacaatgagtggcatgatgtgaaagtaacgcgg
aatttgcgtcagcactcaggcattggacatgctatggtaacaatatctgtggatgggata
ctgaccaccacaggatatactcaagaggactacaccatgcttggctctgatgactttttc
tatgttggaggaagtcctagtacagctgacctgcctggatcacctgttagcaacaacttt
atgggttgcctgaaggaggttgtgtataaaaacaatgacgttcggctggagctgtccaga
ctggcctttaaaggcgaccccaaaatgaagatccatggagttgttgccttcaagtgtgag
aatgttgctacattcgatcccatcacatttgagacacctgaatccttcatcacacttctt
aaatggaacactaagaagaccggttctatttcctttgacttccgcaccactgagcccaat
ggacttctgctctttaaccacgggaaaccgaagcaacagaccaaagagaccaagagccct
ctcacactgaaggtggacttctttgccattgagatgctggatggtcttttgtacctgctt
ctggatatgggatcaggcacaaccaagacactggctgtgaacaaaaaagtgaatgatgga
gagtggtatcatgtggatttccagagggatggaaaatcaggtactatctctatcaataca
attcgcacaccataccaagccccaggagaaagtgagattctagatctggatgataacctg
tatctaggaggactgccggaaaataaagctgacatggtgtttcctactgaggtgtggacc
gctctgctcaattatggtttcgtaggctgcatccgtgacctgttcatcaacggtcagagc
aaagatatccgccgcatagctgaggtgcagaaagcagcaggtgtaaagccctcctgcagt
aaagaggcaccgaagcagtgtctcagtaacccctgccaaaacaatggtatctgcagggaa
ggatggaaccgttatgtgtgtgactgctctgggacgggatatcttggtcgctcctgtgag
agagatgccaccatcctcagttacgatggcagtaagttcatgaaggtccagttatctgta
gctatgcatacagaggctgaagatgtctcactacgcttccgatcccagcgggcatatggt
gttctcatggcaaccacttctcgagactccgcagacaccctgcgtctggagctggagaca
agtcgtgtccggctcacggttaatctagactgtgagaggataaactgtaccacgagcaag
ggacctgagaccctgtttgctggtcagaatctgaatgataatgaatggcacacggtgcga
gtgatcaggagagggaagagtctgaagctgtctgtggatgatttgcccactgtggaagga
gagataccaggtgaccacacacagctggagtttcataacatagagacaggaattattaca
gagaaacgctacctgcccatcatgccctccaacttcattgggcatctccagagtctaaca
tttaacggcaagccgtacatcgacctctgcaagaacggagacatcgactactgcgaagtc
aacgccgtgatcggtttcaagaacatcattgcggatccggtgaccttcaagtcctgctca
agctatatgactctgagcacactgcaggcgtactactccatgcacctgttcttccagttc
aagaccacctcatccgacggactcatcctgttcaacagtggagatgggaatgacttcata
gctgtagagctggttaagggctacctgcattacgtctcagatctgggaaacggtgctcat
ctcatcaaaggaaactcaaacaaacctctcaatgacaaccactggcacaatgtcattatc
tccaaagacacaaataacctgcacaccgtcaaaatcgacaccaaaatcaccacccagacc
actgtgggggccaaaaacctggacttaaaaggtgatctttatattggcggtgttcccgag
gagatgtacaaagatttacccaagttagttcacgcaaaagaaggatttcaaggctgtttg
gcgtctgtggatctgaacggccgtttgccagacctgatgtcagaagcgctggcctgtgtt
ggacagattgagagaggatgtgaagggcccagcacaacctgtcaggaggattcttgtgcg
aatcagggcgtttgtctccagcagtgggagggcttcacctgcgactgcagtatgaccaca
tacggaggacctctgtgtaatgatgctggcaccacgtatatatttgggagagatggtggt
ctgatcacatacacgtggccgccgaatgaacggcccagcacgcgagcagaccggctggcg
atgggattcagcactcagctcaaagaagcaatactggtgcgagtgaacagctcctctggg
ttaggtgactatctcaagctacacattgtaaaaggctacgttacagctatatttaatgtg
ggcacagatgacatcaacatcgaggagaaatcaaagtttgtaaatgatggaaagtaccac
atagtgaagtttacgaggagtggcggcaatgccacactgcaggtggacgatctgcctgtt
attgagcgataccccacaggaaacattgatagcgaacggctggcgatcgctagacagcga
attccatatcgactcggtcgagtagttgacgaatggctactcgacaaaggccgccagctc
acaatcttcaacagccagatgaccatccagatcggcggttgggaaagagaccacagccgt
gccttccagggccaaatgtctggtttctattacaatggattgaaagtttttaacatggct
gtggaaggagatcccaacattcgcatcgaaggcagcgtgaggctggttggggaggcgcaa
tcttcctccataacgccacagtccagtgctacggtccatcgctctgagacctctacctca
gttatggagatcatcaccacaaccacctccaagcaccagatgaaacacaccacaccagga
gaaccccagcagactactgatgacttgttggtggcatctgccgagtgcccgagcgacgat
gaggacattgacccgtgcgagccgagctcaggtgggttagctaaccctacaggccccgtg
gtgaagagctatcctggtcagtcagatgttttccgtgagtccagcagtaccacaggcatg
gtggttggcatcgtggtcgctgccgcactttgtatcctcattcttctctatgccatgtac
aaataccgcaaccgtgacgagggatcgtaccacgtggatgagagccgcaactacatttgc
aattcagcccagtcaaatggatcagtggtaaaggagaaacccatggacggtaccagttgt
gtcagtaagagcaagaaaaacaaaaacaaggagtattatgtgtga
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