Ctenopharyngodon idella (grass carp): 127525374
Help
Entry
127525374 CDS
T08802
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04814
Motor proteins
cide05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127525374
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127525374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127525374
03036 Chromosome and associated proteins [BR:
cide03036
]
127525374
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cide04812
]
127525374
Membrane trafficking [BR:
cide04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
127525374
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
127525374
Cytoskeleton proteins [BR:
cide04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
127525374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
MVD-like_N
Motif
Other DBs
NCBI-GeneID:
127525374
NCBI-ProteinID:
XP_051773847
LinkDB
All DBs
Position
13:5445938..5480665
Genome browser
AA seq
1264 aa
AA seq
DB search
MSQMKRYTYSRTTSSGSSRMSSDGGGRPVKVGSLVEVIGKGHRGTVAYIGNTLFASGKWV
GVILEEAKGKNDGTVQGKRYFTCQENHGIFVRQSQIQLVEDLADTTSPDTPEAATSKVLK
REMIEGPKANKLRGTKPKKAPTTRKTTARRPKQTRAGVGVKVGSGSASAGEMSSSEPSTP
AQTPLAAPVIPSPLGKLPSPGAPPIPGPSKEEESLRAQVKDLEEKLETLKMKRTEDKAKL
KELEKHKIQLEQLQEWKSKMQEQQNELQKQLKEAKREAKEALEAKEHYMEEMSDTADAIE
MATLDKEMAEERAESLQLEADALKERVDELTMDLEILKHEIEEKGSDGAASSYHIKQLEE
QNARLKEALVRMRDLSASEKQEYAKQQKQMEKKNFELDTLRCQKEKLQEEMKMAEKTIDE
LKEQVDAALGAEEMVEMLTERNLDLEEKVRELKETVTDLEAINEMNDELQENARETELEL
REQLDLGAAGVREAEKRVEAAQETVADYQQTIQKYRELTAHLQEVNRELMSQQEANAELQ
QQPAEIFDFKIKFAETKAYAKAIEMDLRKMEVAQANRQVSLLISFMPDSFLKHGGDHDCI
LALLLIPRLICKAELISKQAQEKFELTETCSQRAGMRGAAGERLSFAAGLIYSLTLLQAA
LHKYEHALSQCSVDVYKRVGSLYSEMSVHERSLDFLIDLLYKDLLDETVNVEPLTKAIKY
YQHLYSIHLAEQPEDCTMQLADHIKFTQSALDCMAVEVGRLRAFIQTGQDEEGFCVLLKD
LDTSCSDIRQFCKKIRRRMPGTDAPGIPAALSFGPQVCETLAESRRQLAWVNAVLQEVAA
AAAQLIAPLSEHEGLPAVKLEDMAFKAAEQIYGSQGINPQECLRQSCSVVIATMNKMATA
MQEGEYDSDRPQNGISPVEVRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEEL
SEANVRLSLLEKKLDSASKDADERVEKIQTILDETHSILKKKEKEFEETMDALQADIDQL
EAEKAELKQRINSQSKMTIEGLRGSQASGIASIVTCGITAEEQKGVCAAAGVQVIDSPLL
TQQIEAQRLSIKHLKNENNRLKAEKMRVQLASLPPLNVTKLGWREGCRPEVLSSALYRKT
DQLLDTLLQMSANVKVVDITGKSPVSPSAQLLEQTARLQSLSDTLDRLKDEVAEHVVTHR
PGAQVSSDFATFPCTSFVKAKEEKKGDAVLVGRVMMPCARGQEQVHRLVLSQTELQRVHR
LLQT
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagatgaaaagatacacttacagcaggaccaccagtagtggcagcagcagaatg
agttcagatggaggtgggcggcctgttaaggtgggttctctggttgaggtcatcggtaaa
ggccatcgaggtacggtggcatatattggaaacaccctctttgcctctggaaaatgggtg
ggagtcattctagaggaagcgaaaggaaagaatgatgggactgtgcaaggcaaacgatat
ttcacctgtcaggagaaccatgggatatttgtacgccaatcacagattcagttagttgaa
gatttggctgacacaacatctcctgacacacctgaagctgccacctccaaagtgctgaaa
cgagagatgatcgaaggtccaaaggcaaacaaattgcgaggaaccaaaccaaaaaaggca
cctacgactcgtaagaccacggccagaaggcccaagcaaacacgggctggagtgggtgtg
aaggtgggctctggatcagcgtctgctggagagatgagcagcagtgaacccagcacacct
gcccaaacgccactggctgctccagttataccatcacctttggggaagctgccctctcct
ggggctcctcccatcccaggccccagcaaggaagaggagtcactgcgtgcccaggtgaag
gatctggaggagaagttggagacgctgaagatgaagaggacagaggacaaggcgaagctg
aaggagctcgagaagcacaaaattcagctggagcagctgcaggagtggaagagtaagatg
caggaacaacaaaatgaactgcagaaacaactcaaagaggccaagagggaagctaaggaa
gctcttgaagctaaagagcactacatggaagagatgtcagatacagcagatgccattgag
atggccacactggataaggaaatggctgaagaacgggccgaatcactgcaactagaggct
gatgctctaaaagagagagtggatgagctgaccatggacttggagatactcaaacatgag
attgaggaaaaaggttcggatggagcagcatctagttaccatataaagcagttagaggag
cagaatgctcgactgaaagaggctttggtgaggatgcgtgacttgtcagcatcagagaaa
caagagtatgcaaagcaacagaaacaaatggagaagaaaaattttgagctggatactcta
agatgccagaaagagaaactacaggaggaaatgaagatggctgagaaaactatcgatgag
ctcaaagagcaagtggatgctgctctcggggcagaagagatggtggagatgttgacggag
cgtaatctggacctggaggagaaagtacgggagctcaaagaaactgtcacagatctggaa
gccatcaatgagatgaatgatgagcttcaggagaacgccagagagacggagctggagttg
agagagcagttggatctgggtgctgccggcgtcagggaggcggagaagcgggtggaagcg
gcacaagaaacagtggcagactaccagcagaccatccagaaatacagagagctcactgca
cacctgcaggaggtgaacagggagctgatgagccaacaggaagccaacgctgagctgcag
cagcagcctgcggagatctttgattttaagattaaattcgctgaaaccaaagcctatgcc
aaggccatagaaatggatctgcgtaaaatggaggtggctcaggctaacagacaggtgtca
ctgttgatttccttcatgcctgactccttcctgaaacacggaggagaccatgactgcatc
ctggctctactgctcatcccacgactcatctgcaaggcagagctgatcagtaagcaggcc
caggagaagtttgagttgactgagacgtgctctcagagggccgggatgagaggagccgcc
ggcgaacggctgagctttgctgctggactcatctattctctcacactgctacaggctgca
ctgcacaaatatgaacatgctctgagtcagtgcagtgtggacgtgtacaagcgtgtgggt
tctctgtactctgaaatgagcgtccatgagcgttccctggatttcctcatagacctcttg
tacaaagacctgctggatgaaactgtcaatgtggaacctctaaccaaagctattaaatac
tatcagcatctttacagtatccatcttgccgaacagcctgaggactgtaccatgcagtta
gcggaccacatcaaatttacccagagtgctctggactgtatggcagtagaagtggggcgt
ctaagggccttcatacaaacaggacaggacgaggaagggttttgtgtgctgctgaaggat
ctggacacttcctgtagtgacatacgacagttctgcaagaagatccgccgtcgtatgcca
ggcacagatgcaccaggcattccagctgccctcagcttcggaccacaggtgtgtgagacc
ctggcagagagcagaaggcagctggcctgggtgaatgctgtgctccaggaagtggcagca
gcagccgctcagctcatcgcccctctcagcgaacatgagggacttccagccgtcaaactg
gaagacatggcctttaaagcagctgaacagatctatgggtcacagggcataaacccccaa
gagtgtctgcggcagtcatgcagtgttgtcatagcaaccatgaacaagatggctaccgct
atgcaggagggagaatatgactctgacagaccacagaatgggatatctcctgttgaagtc
cgagcagcggcactaagggcagaaatcactgatgctgaaggacttggtctcaaacttgag
gacagagaaactgtaatcaaagagctgaagaaatcccttaaaataaagggagaggaactg
agtgaggccaatgtgcgtctcagtttgctggagaaaaagctggacagtgcgtctaaagat
gcagatgagcgagtggagaagattcagacgatcctagatgagacgcattcaatcctgaaa
aagaaagagaaggagtttgaggagaccatggatgctctccaggctgacatagaccaacta
gaggcagagaaagcagagcttaagcagagaatcaacagccaatcaaaaatgaccattgag
ggattgagaggaagtcaagcctctggcatcgcctccattgtgacttgtggcatcactgct
gaagaacaaaaaggagtgtgtgcagctgctggagtgcaagtgatagattccccactgctg
actcagcagattgaagctcagcgactcagcataaagcacttgaagaacgagaacaacaga
ctgaaggcagaaaagatgcgtgttcagctggcgtctctccctcctctgaatgtgacaaag
ctgggctggcgagagggctgcaggccggaggtgttgtctagcgccctctaccgcaaaaca
gaccaactactggacactctgctccagatgagtgccaatgtgaaagtggtggacatcaca
gggaaatctccagtgagccccagtgcgcagctcctagagcaaactgcaagactgcagtcg
ctcagcgacaccctcgataggcttaaggatgaggttgctgaacatgtagtgactcatagg
cctggagctcaagtctcatctgattttgccacttttccctgcacttcctttgtgaaggca
aaggaggagaagaaaggagatgctgtgttagtcggccgtgtgatgatgccttgcgctcga
gggcaggaacaggtgcatcgtctggtgctttcacagacagagttacagagagttcatcgc
cttctccagacttaa
DBGET
integrated database retrieval system
