Ctenopharyngodon idella (grass carp): 127525396
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Entry
127525396 CDS
T08802
Name
(RefSeq) pre-mRNA-splicing factor syf2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127525396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127525396
Spliceosome [BR:
cide03041
]
Complex B
Other components
Prp19-related factors
127525396
Complex C
127525396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
AAR2_1st
Motif
Other DBs
NCBI-GeneID:
127525396
NCBI-ProteinID:
XP_051773890
LinkDB
All DBs
Position
13:5397751..5404159
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AA seq
238 aa
AA seq
DB search
MAANAEVVAPSSEEEAAETPAAQKREERLRKFRELHFKRNEARKLNHQEVVEEDKRLKLP
SNWEAKKARLEYELMVDQKKKECAERGEDYDRVKLLEISAEDAERWERKKKKKNPDPGFS
GYAEAQLRQYQRLTRQIKPDMDNYERQREECGEDFHPTSNSLIHGTHVPSKESIDRMVDD
VEKQIEKRSKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaacgcagaggttgttgctcccagcagtgaagaggaagccgcagagactcca
gcagcacagaagagggaagagagactcagaaagttcagagagcttcatttcaagaggaat
gaggcccgaaagctgaatcatcaggaggtggtggaggaggacaagagactgaagctgccg
tcaaactgggaggccaagaaagctcgtctagagtatgaactcatggtggaccaaaagaaa
aaggagtgtgcggagcgcggcgaggactatgaccgtgtgaagctcctggagatcagtgct
gaagatgcagagagatgggagagaaagaaaaagaagaaaaaccctgatccaggattctca
gggtatgctgaggcccagttgaggcagtaccagagactgacaaggcagatcaagccggat
atggacaactatgagagacagagagaggagtgtggagaagatttccaccccacctccaac
agtctgattcacggcactcacgttccctctaaagagagcatcgaccgcatggtggacgac
gtggagaaacagattgaaaagcgctcaaaatacagtcggcgcagggcctacaacgacgat
gctgacatcgattatatcaacgagaggaacgccaagttcaacaagaaggctgaacgtttc
tacggcaaatacaccgcagagatcaaacagaacctggagagaggaactgccgtgtaa
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