Ctenopharyngodon idella (grass carp): 127525404
Help
Entry
127525404 CDS
T08802
Name
(RefSeq) protein strawberry notch homolog 2a isoform X1
KO
K26273
protein strawberry notch
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127525404
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127525404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
IL28A
Motif
Other DBs
NCBI-GeneID:
127525404
NCBI-ProteinID:
XP_051773903
LinkDB
All DBs
Position
2:complement(41313681..41345386)
Genome browser
AA seq
1570 aa
AA seq
DB search
MPILATSVVMDTEDYLHPEDPQLGSPKFIAPSPPLPSSMENQLYPSNSWAYAQQTQYNQH
YPMQSGRQLQPNPSSVNLDLSDIDFHDLVRNGDFSQCIDELSNTSLFSSPSESLLEYPDP
SGFGTDGLAQLPAEGTAAQMYWDIPGHSQRQQNLSSRLDDISVILSAPVTGFKAAPLPPP
EEEEEADEEETEELGHADTYAEYKPSKSTIGISHPDIVVETNTLSSVPPPDITYTLSISD
STINSGLLSALQLEAIIYACQQHEVILQNRERAGFLIGDGAGVGKGRTVAGIILENFLKG
RKRALWFSVSNDLKYDAERDLKDIKALNIPVFALNKIKYGDTATSEGVLFATYSALIGES
QAGGQHRTRLKQILDWCKPNFDGVIVFDECHKAKNATSTKMGKAVLDLQSKLPLARVVYA
SATGASEPKNMIYMSRLGIWGQGTPFKTFDDFLHAIEKRGVGAMEIVAMDMKVSGMYIAR
QLSFSGVSFRIEEITLDEEFKLVYNKAARLWAEALELFTRAADTLGLASRKSLWGQFWSS
HQRFFKYLCIAAKVRRLVELAHTEMQHGKCIVIGLQSTGEARTREVLDENDGHLDRFVSA
AEGVFQSLVQKHFPTQKPKREKSAASKRKRKPRGRTSKFPKHCVEVGGVIKISDDSDSDS
DEIDSESNSSPDSLQDNDDVIFVNHINGPAARLEELKQRLLVKIAELGKELPLNTLDELI
DRFGGPEKVSEMTGRKGRVVRRPDGSVRYETRAEQGLTIDHVNVREKERFMTGEKLIAII
SEAASSGISLQADKRVQNRRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYIFLISE
LAGERRFASIVAKRLESLGALTHGDRRATESRDLSQYNFENKYGTKALDKITKAILGHID
NKVPPPKGYPGGDMMFFKDMKKGMIDVGIFCREPRLGLNTEKDCTITKFLNRILGLEVHQ
QNSLFQYFTDNFDYLINKDKKEGKYDMGILDLAPGNDEIHEETQEKFLTPGNPQEGQVIL
YKISVDRGMPWEEACSKAEKLAGEYEGFYLSNKLRGSQPCVLLAEQGRGRNLILYKPNIG
KQAHPENLDNLLLRYYKVTPDEAKDFWKSQFDFSFRNCTHANWKGKCKQIEEGQECFLGM
RLRQYHMLCGALLRVWKRVSDIVSDITNSSILQIVRLKTKQNSKQVGIKIPENCVSRIRA
ELSRMDEEVKKARREREQLAKERLHQEMLAKMINARKLIANPPRPLPNHLHYPRSLLAPA
VQPKTEAVSEVLDLTISPCPSPDIKPSASDLNGVSLNGAMLTGRGRPCAVVPETYNLEEL
ISQERQRHSQVPLNLNMRVPSSHAALNIPQQHVHTLKQNHSSFGVLTQQQSGSHVQPSTQ
YSTLLSQLHDKSLVLQLLNQMQQQTVASVQSSHVTLHQNSQRMPHTSNSHMQLSKRHPQP
QPLESHVTQPAHERANNDFTFDDLDFGYPSPDSQLKYPFTSQALPSSTPPPPSYSSSLFA
SAPTNSSLSDSSSSSSHFTPSSSSSEQTHLLPNGHSSMDPLDTLDHMIHGTSSDHRQSVI
QFKSVDWDAT
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgcccattcttgccacgtctgttgtcatggacacggaggactatctgcaccctgaggac
cctcagctggggagcccgaagttcattgctcccagtcctcctctcccaagttccatggag
aatcagctgtatccgtctaactcatgggcgtacgcacagcaaactcaatacaaccagcac
tatcctatgcaatctgggaggcagctccagccgaacccgtcctctgtgaatctggacctg
tctgacatagactttcatgacctcgtgcggaacggagacttctcccagtgcatagacgag
ctgtccaacacatctctgttctcctcaccatctgaatctctgttggagtatccagaccct
tcaggatttggcactgatggcctggcacagttacccgctgagggcaccgcggcacagatg
tactgggatatacctggacacagtcagagacagcagaacctgagctccaggttggatgac
atcagcgtgatcctgtcagcgccagtgaccggttttaaggctgctcctctgcctccacca
gaggaagaggaggaggcagacgaggaagagacggaggagttggggcacgcggacacatac
gccgaatacaagccatccaaatctactattggaatctctcaccctgacatcgtagtggag
accaacacactgtccagcgttcctcctcctgacatcacttacacactgtccatttcagac
agcaccattaactctggcctgctgtccgccctgcagctggaggccatcatctacgcctgc
cagcaacatgaggtgattcttcagaacagagagagagcgggttttctgatcggagacggg
gctggtgttgggaagggccgtactgtggccggaatcatactggagaattttttaaaggga
agaaagagagcactatggttcagtgtgtcgaatgatctgaagtacgatgctgagagagat
ctcaaggacataaaagctctcaacatccctgtgtttgctttaaataagattaaatacgga
gatacggctacctcagagggcgttcttttcgccacatactcagcgctgattggagagagc
caggccggcgggcagcaccgcaccagactcaaacagatcctggactggtgcaaacccaac
tttgatggagtcattgtgtttgacgagtgccataaggctaaaaatgcgacctccaccaag
atgggtaaagccgtcctggatttgcagagcaaactgcccctggcgagagtagtgtatgcc
agtgccacaggtgcttctgagccaaagaatatgatatacatgagccgactgggtatctgg
gggcaaggaacaccattcaagacctttgacgacttcctgcatgcgattgagaagaggggt
gttggtgccatggagattgtagctatggatatgaaagtgagcggcatgtatatcgcacgg
cagctgagcttttccggcgtgtccttccgtatagaggagattacactggatgaagagttt
aaactggtctacaacaaagcagctagactgtgggctgaggctctcgagctgttcaccaga
gcagcagacacgttgggtctggcctcccggaagtctctatggggtcagttctggtcgtca
caccagaggttttttaagtacctctgcatcgccgctaaagtccgtcgtctggttgagctc
gctcatactgagatgcagcacggcaagtgcatcgtgattggcctgcagtccactggagag
gctcgtactcgagaggtcctggacgagaacgatggacacctggacagattcgtctccgct
gctgagggggttttccagtcattggttcagaaacacttcccaacacagaaacccaaaaga
gagaaaagtgcagcaagcaagaggaaacgaaaacccagaggccggacttcaaaatttcca
aagcattgtgtggaagtgggtggggttattaaaatcagcgacgattcagactctgactca
gatgagattgacagcgaatcgaactcctcccctgattcactacaggacaatgatgatgtg
attttcgtgaaccacatcaacggacctgctgctagactagaagaacttaagcagaggctg
ctggttaaaatagcagagctggggaaagagctgccactcaacactcttgatgagctgatt
gacaggtttggaggaccagagaaggtgtcagagatgacaggccgaaagggacgtgtagtg
cggcgtcctgatggcagtgtacgatatgagaccagagcagaacagggcctgaccatcgac
catgtcaacgtcagagagaaagagcgattcatgacaggagaaaagctgatagccattatc
tctgaagcggctagctcgggtatttctctacaggcagataaacgcgtgcagaaccgcagg
agaagagttcacatgaccttagagctgccgtggagcgcggaccgcgccatccagcagttt
ggtcgaacacatcgctcaaatcaggttacagctccagagtatatcttcctcatctcagag
ctggctggagagagacgcttcgcctcgatcgttgccaagagattggagagcctgggggcg
ctgacacacggggaccgacgagccactgaatccagagacctgagccagtacaactttgag
aacaaatatggcaccaaagcgttggataagatcactaaagccatcctcgggcacatcgac
aacaaagtccctccaccaaagggctacccaggaggtgacatgatgttcttcaaagatatg
aagaaaggcatgattgatgtgggaatcttctgtagggagccgcgtctgggtctgaataca
gagaaagactgcactatcactaagtttctgaaccgtattttgggtttggaggtccatcag
cagaactctctgttccagtacttcaccgataactttgactacctgatcaacaaggacaaa
aaagagggaaaatatgacatgggaatattggatctggctccgggtaatgatgagattcac
gaggaaacacaggagaagtttctaactccaggaaatcctcaggagggccaggtcatcctc
tataagatcagtgtggatcgtgggatgccctgggaagaggcttgcagtaaagcggagaaa
ctcgctggagaatatgaagggttttacctctcaaacaagctgcgtgggagccagccgtgt
gtcctgcttgccgaacaaggtcgtggtcggaacctcatcctgtataaacccaacatcggt
aaacaggctcatcctgagaacctggacaacctcctcctgagatactacaaggtgacacct
gatgaagcaaaggatttctggaaaagtcaatttgacttctccttcagaaactgcacccat
gccaattggaagggtaagtgtaagcagatcgaggaggggcaggagtgttttctggggatg
cgcctccggcagtatcacatgttgtgtggagctctgctaagggtttggaagcgagtgtct
gacatagtctcggacatcaccaactccagcatcctgcagattgtacggctcaaaacgaaa
cagaacagcaaacaagttggtataaaaatcccagaaaactgtgtatcccgcatacgcgct
gagctctctcggatggacgaggaggtgaagaaagcgcggcgagagagagagcagctcgca
aaagagcgtcttcaccaagagatgctggccaagatgatcaacgcccgcaagctcatcgcc
aaccctccccgccccctcccgaaccaccttcactacccacgatcccttctggcacctgcg
gtgcagccaaaaactgaagctgtcagcgaggtcctggatctgaccatcagcccctgccct
tcgccagacatcaaaccgtccgcgtcagacctaaacggtgtgtccctaaacggagcgatg
ctcactggcagaggacgcccgtgcgcagttgttccagagacgtacaacctggaagaactg
atttcccaggagcggcagagacatagtcaggtgccgttgaacttaaacatgcgtgtgccg
tcgtcgcacgctgctttgaacatcccgcagcagcacgttcacacactaaagcagaatcat
tcatcattcggggtgctgacgcagcagcagagcggctcccacgtgcagccgtccacgcag
tacagcacgcttctgtcgcagctgcacgacaaatccttagtgctgcagcttctcaatcaa
atgcaacagcaaactgtcgcgtcagtgcaatcgtcgcacgtaacgctacaccagaacagt
caacgaatgccgcacacttcaaactcgcacatgcagctttcaaaacgacacccgcagccg
caacccctggagtcacatgtcactcagcctgctcacgaaagagcaaacaatgacttcact
ttcgacgacttggacttcggttacccttcgcccgattcgcaacttaagtacccgttcacc
tcacaggccctgccatcctcgactccgccccctccttcttattcctcctccctctttgcg
tcggcacctacaaactcctccctctctgactctagctcctcctcctcgcacttcactcct
tcgtcttcttcctccgaacagacgcatctgttacccaacggccacagcagtatggacccc
ctggatacactggatcacatgatccacggaacatcctcggatcaccgccagtctgtcatc
cagtttaaatcagtggactgggacgccacctag
DBGET
integrated database retrieval system
