Ctenopharyngodon idella (grass carp): 127525615
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Entry
127525615 CDS
T08802
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cide03016
]
127525615
Transfer RNA biogenesis [BR:
cide03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
127525615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
TPR_GEMI5
Beta-prop_NUP159_NUP214
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
127525615
NCBI-ProteinID:
XP_051774209
LinkDB
All DBs
Position
14:complement(19220468..19239376)
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AA seq
1317 aa
AA seq
DB search
MRNLNLLQRLRCVDLPIPGSPQCFSIRSEAGTVLVASELAITEYDPRSGEIYKEVSLTTD
DYLPEDGSGLVVAIQDLPDQESVCVATANGDVILYNLNTSQLECVGSVDSGLTGMTWSPD
QELVTLTTGQETIIMMTKDFEPITEVAINQDDFGEDKFITVGWGKKETQFHGSEGKQAAQ
RKAAEVQPALPWDDRKPRITWRGDGQFFAVSAVCPNTGARKVRIWNRECVLQATSEVVNG
LEHPLCWKPSGSLIASTQRHLNKHSVVFMEKNGLLHGDFTLPFGKDQVKVKELLWNSDST
VLGVWMEDLKPGENTPNTYIQLWTVGNYHWYLKQSLHFGNEPLRAPACVCWDPEKPLRLH
LLTRGWASYTYDWGWSTQRSHGNDCHDNANVAVIDGDKILVTTFRQCVIPPPMCAFELQL
PVPVNLVTFHSKAQRTNELAALTADGHIYVYGEGGGVENGGVPRVPGFKVISAPLVLRKT
YRVAVDQGEPLTLCLLLWLSEDLFLAVTHRGSLTRLLKLTPSDSQDPKDTLEIRSEVPVD
GHVISLCHSLRNGTVALQLEDGQIRKLLMESSELSLTEWKDSTGNTINFPRPCVQTALCS
LNGEEYLIGLTERSQLYIGDSLVASNISSFVVYDDFLLLTTHSHMCHCLNLSMLSVKGLQ
SALSSDANQNDETVRKVERGSRIVSVVPQDTRLILQMPRGNLETIHHRALVLAQLRKWLD
GLRFKDAFECMRKLRINLNLIYDHNPSVFLDNIEMFLKQIDSINHINLFLTELKEEDTTT
TMYPSPSRSDSSSASGKGGKKVDIICDALRSTMETLDPQKFCLCILTSHVKKTAPELEIA
LQKVHELRVNPPSGSNSVNAEEALKYLLFLVNVNELYEHSLGTYDFDLVLMVAEKSQKDP
KEYLPFLNMLKTLEPNYQRYTIDKHLKRYRKALHHLSKCGEEHFTELLNLVKDQKLYSDA
LELYPSDSEQYKTLSVAYGEHLVEQQQAEQAGLLLWRCGETARALQAFVSCTSWRHALAV
ATHIPLPPEQLALLARDLAEKLLEARRHREAALCLEQYAKDCEEAISALIQGAAWEEALR
LIYLYNRQDIIETNLKSALLDAHSNQTSFLESQKALFIRHKNRLAVVRELKAKAKLELFD
EDGADCADAELYSEASSVLTGSHLGSKYSRSNSRISSRSSKNRRKAEGKKHSLKEGSPFE
DIALLNALTQIITIVDKMREEVHSLLKALVLFQFDGPASSLQRDYSDLLQLMETALPEIW
SVNLQQGQTPLTGPDSTANSIMASFQQQRPAVPQQDTEALTAPKMRNTIKWKLSILK
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacctcaatctgctgcagcgcttgagatgtgtggatcttccaatcccgggatcc
ccacagtgtttctccatcagaagcgaggctggaacagtgctggtggcctccgaacttgcc
atcacagagtacgacccacggagcggagagatttataaagaggtttcactgacgacagat
gactatctcccagaggatggtagtggacttgtagtagcgatacaagatctgccagatcag
gagtccgtgtgtgtggccactgccaatggtgatgtcattctctacaacctcaacaccagt
cagttggagtgtgttggcagtgtggacagtggtctaaccggtatgacttggagcccagac
caggagttggtgactctgaccacaggtcaggagaccattatcatgatgaccaaggacttt
gagccaataactgaggttgcaatcaatcaggatgactttggcgaagataagttcatcaca
gttggttgggggaagaaagagactcagtttcatggctctgaaggcaagcaggccgcccag
cgcaaagcagcagaagtgcagcctgccctgccgtgggacgacaggaagccaagaatcact
tggcgtggcgatgggcagttctttgccgtcagtgctgtttgtccgaatactggtgctcga
aaggttcgcatctggaaccgagaatgtgtcctgcaggccaccagcgaggtcgttaacggt
ctggaacatccgctctgctggaaaccctctggcagcctgatcgcttccacacagcggcac
ctgaacaaacacagtgtggtgtttatggaaaagaacggactgttgcatggagattttact
ctgccttttggaaaggaccaggtcaaggtgaaggagctgctatggaacagtgactctact
gtactgggtgtttggatggaggacttgaagcccggagagaacactcccaacacatacatt
cagctgtggacggttgggaattatcactggtatctgaagcaaagtttgcatttcggcaat
gagccccttagggctccagcatgtgtgtgttgggatccggagaagcccttgcgtctccac
ctcctgactcgaggatgggccagctacacctacgactggggctggagcactcagcgcagc
catggcaatgattgccatgacaatgccaatgtggcagtgattgatggagataaaattctc
gtgacaacattccgccagtgtgtgatccctccacctatgtgtgcatttgaacttcaactt
cctgttcctgtcaacttggtcaccttccattctaaagcccagaggaccaatgagcttgca
gctctcacagccgatgggcatatttatgtatatggtgaaggtggtggagttgaaaatgga
ggtgtacccagagttcctggctttaaagtcatctccgcaccattagtcttaagaaagaca
tacagggtcgccgtggatcagggagaacctctgacgctgtgcttgctgctgtggttaagt
gaagatttgtttttggctgtgacccacagaggaagcttgacacgcctgttgaaactcacc
ccatcagacagccaggaccccaaggacacgctggagatcaggtcagaagttcctgtggat
ggtcatgtgatcagcttatgccacagcctcagaaatggcactgtggccctgcaacttgaa
gatggacagatccggaaacttcttatggaatcttcagagctcagtctaactgaatggaag
gattctactggcaataccatcaactttccccggccttgtgttcagacggcactgtgttcc
ctcaatggagaagaatatttgataggcctcactgagagatcacaactctacatcggtgac
tcactggtggcttccaatatctcttcatttgtagtttatgacgacttcctcctgctcacc
acacactctcatatgtgccactgtctcaacctaagcatgctctctgttaaaggtctgcag
tcagctctgagctcagatgccaatcagaatgatgagaccgtaagaaaggtggaacgaggc
tctcgtatcgtttctgtggttccccaggacaccagactcatactgcagatgccacgaggg
aacctggaaaccattcatcatcgggctcttgtacttgctcagctcagaaaatggcttgat
ggtctcagatttaaagatgctttcgagtgcatgaggaagctgaggatcaacctcaacctc
atttatgaccacaatccctctgtgtttcttgacaacattgagatgttcctgaaacagatt
gactccatcaaccacatcaacctgtttctcactgaactcaaagaggaagacaccaccaca
acaatgtacccaagtccttcacgctcagactccagttctgcttcaggtaaaggaggaaag
aaggtggacatcatctgtgatgctttgcggtccacaatggagactctcgacccacagaaa
ttttgtttatgtattcttacatcacacgtgaaaaaaactgcaccagaactggaaatcgct
ctacagaaggtccatgagttgcgagtgaacccacccagtggctccaacagcgtgaacgca
gaggaagctctaaagtatcttcttttcctcgtcaacgtgaacgagctgtatgagcactcc
ctcggcacgtacgattttgaccttgtgctcatggtggctgaaaaatctcagaaggaccct
aaagagtacctgcccttcctgaacatgctgaaaaccctggagccaaactaccagcgctac
actattgataaacacctcaaaagatacaggaaggccttacatcacctcagcaagtgtggt
gaagaacacttcacagagttgttaaacttggtgaaggatcagaaactgtacagtgatgct
cttgagctctatccttcagacagtgagcaatacaagacccttagcgtggcctatggagag
catctagttgagcagcagcaggcggagcaggcaggactgttactatggagatgtggagag
acggcccgtgccctgcaggccttcgtcagctgtacaagctggagacatgccctcgccgtg
gcaacacacatcccattgccaccagaacagctggcactgcttgcccgagacctggcagag
aaacttctggaggccagaaggcacagagaagccgccctgtgtttggagcagtatgctaag
gactgtgaggaagcgatatccgctctgatacagggagctgcatgggaagaagcactgaga
ttgatttatttgtacaacagacaggacatcattgagacaaatctgaagtctgctctttta
gatgctcacagtaatcagacgtccttcctagagtcccagaaggctttgttcatccgccac
aaaaaccgccttgctgtggtccgagaacttaaagccaaggccaaacttgagttatttgat
gaggatggtgctgactgtgcggatgctgaactctactcggaggccagcagcgtcctgacc
gggagccatcttggctcaaaatactcccgcagcaactctcgcatttcatcgaggtcatct
aagaatcgaaggaaagcggagggaaagaaacacagtctgaaggagggaagtccatttgag
gacatcgccctcctgaacgcacttactcaaatcatcaccattgttgataagatgagagag
gaagttcacagcctgctaaaagctctggtgctcttccagtttgatggtccggccagcagc
ctgcagagagactacagtgacctgctacagctcatggagacggcccttccagagatctgg
agtgtgaacctgcagcagggccaaactccactcacaggtcctgactcaacagccaatagt
attatggcatcgtttcagcaacagagacccgctgtgcctcagcaagacacagaagccctg
actgctcctaagatgagaaacaccatcaagtggaaactcagcattctcaaatag
DBGET
integrated database retrieval system