Ctenopharyngodon idella (grass carp): 127525616
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Entry
127525616 CDS
T08802
Name
(RefSeq) TBC1 domain family member 2A isoform X1
KO
K20165
TBC1 domain family member 2A
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127525616
Membrane trafficking [BR:
cide04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
127525616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_alsin
PH_3
PH_13
PH_8
AKNA
DUF6030
ZapB
Motif
Other DBs
NCBI-GeneID:
127525616
NCBI-ProteinID:
XP_051774211
LinkDB
All DBs
Position
14:19239888..19259733
Genome browser
AA seq
935 aa
AA seq
DB search
METKGSSSTPPPPDLHKSPADECVGAEEPQQQSLGQSDGSHDKMDTNIHAAQPDGTSAIF
RRTPTQSGTKLCGYLNKQGGPLKAWKSRWFAYEEKSCQLFYYRMAQDINPLGKVDLSRAT
FSYPLQGEEGTFHIQTPERTFVLKAANRDAQMYWLQQLQMKRALYREQQVEHQPMPKPDN
LTVESTPSANCPADFLPMVKTPSGLVGEEAASLPAPGLKSPLNMSIKHPLIELQNTMHSF
RNRQSQEIRQSVFHIDDPNVTQKTLSSKTSTLAVPTSGSSQTPEFPVNAKCEDLQKNHLS
TVSQNRKGYKEKFKPLDLDTSQHEKLSLAEEVKAQKELVLLLHKVLEDAQLEKRTCAQFL
AAEGEQERLELLKHGERRAAELRDHLESLQQENESLRRDLNQRDSHIAELQESVKLLMHK
NQAKQEVLLKLSEKLAACGEDQHYTNGLETETFKQLTLENEHLKDDLKAYKTQNQYLNSE
IYQLTTLWRKSSEQEQSLIVKCAVLEANNCQMESRYLGILQKLLESKELNPEQREAIKKV
IKDAVQADLNTVIKLNPISDYDEYGFRIAIDYKVEDLKLLSKIQALEIRSQNLLNQEECD
GPLLARCAQLLFGRPEAELSSSAEMKSLLRTGLPREYRVKFWRFMIQTRTKSVRGRHPNR
YQELCENSRTSPHLVPRQIQLDLDRTLTSNQLFSPPSSPMIQKLERVLQAFSWQNPTIGY
VQGLNRLAAIALLVLQDEEDAFWCLVVIVEYIMPRNYYTKDLLGCQADQRVLKDLMFEKL
PRLTAHLEALKVDVSLITVEWFLVLFVESLPTRILFKVWDAFLYEGIKVIFRYALALFKY
KEEDILKIQDSAEMYQYLRIFPNTIVDGRKLTSIAFNDMNPLPMKLLWNRRGVHLERLHA
EIKELENLQKAYKAENVQCKDKELDTLASEDEEEV
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaagggaagctccagcactccacctccaccagacttgcacaaatctccagca
gatgagtgtgtcggcgctgaggagccccaacagcagagtttgggccagtcagatgggtca
catgataaaatggacaccaatatccatgctgctcagcctgatgggacctctgccatcttc
agaaggacacccactcagtccggcactaaactatgtggctacctcaacaagcagggtgga
cctctcaaagcctggaagtcccgctggtttgcctacgaggagaagagctgtcagctgttt
tactaccgcatggcacaggatatcaatcctctgggtaaggtggatctgtctcgtgccacg
ttcagttacccgttgcagggagaggagggaacctttcatatacagacaccagagcgcact
ttcgttctcaaggcagctaacagagatgcgcagatgtactggttgcaacagctgcagatg
aaacgtgcgttatacagggagcagcaagttgaacatcagcccatgccaaaaccagacaac
ctaacagtggaaagcacaccatcagcaaactgccctgctgacttcttgcccatggtgaag
acgccttctggtctggttggtgaagaagctgccagtctgccggcaccaggattaaaaagc
cccctcaatatgtcaatcaaacatccgctaattgagctacagaacacaatgcacagtttc
cgtaaccggcagtcacaagaaattagacaaagtgttttccatattgacgacccaaatgtc
acccaaaaaacactctcatctaagacatccactttagcagtccccacatccggttcttct
caaaccccagaattccctgttaatgccaagtgtgaggacctgcaaaaaaatcatctatcc
acagtgtcacaaaacaggaagggttacaaagaaaagttcaaacctctggacctagacaca
tctcaacatgaaaaactttccctggctgaagaggtcaaagcacagaaggagttggtgttg
ctgctacataaagtgctggaagatgctcagctagagaaacgtacctgtgctcagtttcta
gctgcggagggagagcaggagcgcttggagctcctcaaacacggtgaacgacgtgcagcc
gaattgcgagaccatctggagtcactgcagcaggagaatgagagcctacggagggatctg
aaccagagggactcccatattgctgaactccaagagagtgtcaagctcttgatgcacaag
aaccaggccaaacaggaagtgttattgaagctatctgagaagttagcagcctgtggggaa
gaccagcattacaccaatgggctggaaactgagaccttcaaacagctaacactggagaat
gagcatttgaaagatgatttgaaagcatataaaacccagaaccagtatctaaactctgag
atctaccagctgacgacgctttggagaaaaagttcagaacaggagcaaagtctgatagta
aagtgtgctgttttagaggccaataactgtcagatggaaagcagatacctgggaatcctc
cagaaactcctggagagtaaggaattgaatccggagcagagggaagcaatcaagaaggtg
attaaagatgcagttcaggcagatctgaacacagtcatcaaactaaaccccatcagtgat
tacgatgaatatggatttaggatcgcaatagactacaaagttgaggacctgaagctcctt
tctaagatccaggccctggagatccgatcccaaaacctgctgaatcaagaggaatgtgat
ggcccgctgttggctcgttgcgctcagctcctgttcggacgtcctgaagctgaactgtct
tcatcagcagaaatgaagagtctactccggacaggcttaccacgagagtaccgcgtgaag
ttttggcgttttatgatacagactagaaccaagtcagtaagggggcgtcatcccaaccgc
tatcaagagctttgcgagaacagcagaacctcaccgcacctggtgcccagacagatccag
ctggacctggatcgtacgttgacctccaatcaactcttttcccctccttcaagccccatg
attcaaaagctggagagagttcttcaagcattctcatggcaaaaccccaccatcggctac
gtgcagggactcaacagactggcagccattgctctgctggtactacaggatgaggaagat
gccttctggtgcctggtagtgattgtggagtacatcatgcctcgcaattactacactaaa
gacctgctgggctgtcaggccgaccagcgtgtactaaaggacctcatgttcgagaaactg
cctcgactcacagcccatctggaagcgctaaaagtagacgtatcactcatcactgttgaa
tggttcctggtgctgttcgtggagagtctgcctacccgcatactgtttaaagtatgggac
gccttcctgtatgagggcatcaaggtgatattccgatatgcactggctcttttcaaatac
aaagaggaagacatcttaaagattcaagacagtgccgaaatgtaccagtatctccgcatc
ttcccaaacaccattgtagatggaaggaagctgacaagcattgccttcaatgacatgaac
ccactgcccatgaagctactgtggaaccgtcgcggcgtgcatctggaacgtctccacgct
gagattaaagagctggagaacttacagaaagcatacaaagctgaaaacgtccagtgcaaa
gacaaagagctggacaccctcgctagtgaagatgaagaggaggtatag
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integrated database retrieval system
