Ctenopharyngodon idella (grass carp): 127525662
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Entry
127525662 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130 isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127525662
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127525662
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127525662
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
PspB
DUF2254
Motif
Other DBs
NCBI-GeneID:
127525662
NCBI-ProteinID:
XP_051774288
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All DBs
Position
14:6808627..6856426
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AA seq
428 aa
AA seq
DB search
MLKRLAAPASCSSCLLAFLLAFVSPRCTLSIGADKTMVNKEDYYSATVNATVLDHKGNPQ
QMVTKNDGRYGQNSPKTEAKGIVIAPAAVNGAVDLQGCCPHTRFVVPPKTTHWVAIMQRG
KCTFKEKILKAAAFNASAVIIYNNSTKEDTVTMAHEGTGDIVAVMITESFGKEILGFLEK
NQTVLVTVMVGSRGLPKNINRGSLVFVSISFIVLMIISSAWLIFYFIQKIRDTSARDRSQ
RRLGDAAKKAISKLTTRTVKRGDKETEPDFNHCAVCIEGYQLNDVVRILPCKHVFHKMCV
DPWLNEHCTCPMCKLNILKALGVMPNLPCVDNMAFDMDRMSRSQTSSQRTALVDLSSETS
ISLEPLRHSSSSQLPSDEELIPRSGEINIAVTKEWFIVASFGVLSALTLCYMIIRATSST
PTVDLKLE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagagattggccgcgccggcgtcatgcagcagctgccttctcgccttcctcctt
gccttcgtctcgcccaggtgtactctgtctatcggtgccgacaaaactatggtgaacaag
gaggattattatagcgccacagtcaacgccaccgttttggaccataaaggcaatcctcaa
cagatggtgacgaagaatgacgggcggtacgggcagaattctcccaaaacagaggcaaag
gggattgtgatcgcacctgctgctgttaatggagcggtggatttgcaaggctgctgtccg
cacacccggtttgttgtgcctccaaagaccacacactgggtggccattatgcagagaggg
aagtgcaccttcaaggagaagatccttaaggcagctgctttcaatgcctcagccgtcatt
atctacaataacagcaccaaagaggacacagtcacgatggctcatgaaggcactggagac
atagtggcagttatgatcacagagtcctttggaaaagagattctgggattcctggagaag
aaccaaactgtgttggtcaccgtgatggtggggtcacgagggctgcctaagaacatcaac
cgtggctccttggtgttcgtctccatctcctttatagtactgatgattatctcttctgct
tggctcatattctacttcatccagaagatcagagacaccagcgcacgggaccgcagtcag
cgacgactgggagatgctgccaagaaggctattagcaagctgactaccaggacagtaaaa
agaggggacaaggaaacggagccagattttaatcattgtgcggtgtgcattgaaggttat
cagctaaatgatgtggtccgcatcctaccttgcaagcatgtcttccataaaatgtgtgtg
gatccgtggctaaatgagcactgcacctgtcctatgtgtaaactcaacatccttaaagct
ctgggggttatgcccaacctgccctgcgtggacaacatggcttttgacatggatcggatg
tcccgcagtcagacttccagccagaggacggcgctggtggacctgtcctctgagaccagc
atcagtctggagcctctacgccactccagttcctcccagcttccctccgacgaagagctc
attcctcgctctggagagatcaacatcgctgtcactaaagagtggtttattgttgccagc
ttcggcgtcctctctgctctcacactttgttacatgatcatcagagctacttccagcacc
cccactgttgacctgaagttggaatga
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