Ctenopharyngodon idella (grass carp): 127525667
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Entry
127525667 CDS
T08802
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04210
Apoptosis
cide04218
Cellular senescence
cide04620
Toll-like receptor signaling pathway
cide04621
NOD-like receptor signaling pathway
cide04622
RIG-I-like receptor signaling pathway
cide04623
Cytosolic DNA-sensing pathway
cide04625
C-type lectin receptor signaling pathway
cide04920
Adipocytokine signaling pathway
cide05132
Salmonella infection
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127525667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127525667
Transcription factors [BR:
cide03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
127525667
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
127525667
NCBI-ProteinID:
XP_051774292
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All DBs
Position
14:complement(18205418..18252922)
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AA seq
932 aa
AA seq
DB search
MAGEDPYHTGFMEQIEFSNETMWMNMDPTYPVIHNNNVMRTVDGPCLRIVEQPKQRGFRF
RYGCEGPSHGGLPGASSEKNRKSYPQVKICNYQGAARVVVQLVTNSPNPHLHAHSLVGKQ
CDKGICIADLQPKDPVISFPNLGILHVTKKNVSKVLEERMIEAYRMGYNYGISIHPEIDV
LQGEVRIPRELTDSERSLISNAATHQSKEMDLSVVRLMFTAFLPDSDGGFSRRLEPVISD
PIYDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDDSGLTWEAY
GDFSPTDVHRQFAIVFKTPKYRDQNLQKPISVFVQLKRKSDNETSEPKPFTYHPQIIDKE
EVQRKRQKTLPNFQDYSGAGGGAGGMFRGGGGGSTAGGGPSGGGGHFFQGYQNYNNYGSG
YNFSGMGGGGTTIKHTCQEPVEDSDEDSDSDTDDDPASGGVVRICAQPEPVPLNLGVASD
DTQPTEYLELDATGCVLESHLAELAERQAQALFHYALSGDARMLLAPQRPLMTTQDENGD
TGLHLGVIHSQTDAVRNLAQVISALPGEDVLNMRNDLYQTPLHLAVLTQQTEVVGALLEA
KVDITLTDRHGNTALHLAAQQKEESMLRLLLKHKSMAQLTSIPNTAGLCPLHLAVKANSL
SCVRALLDGGADVEVQELTCGRTALHLATELGNLSLAGCLLLEGNACVDSVTYNGSTPLH
IAAGRDSTKLSALLMAAGADPHKENFEPLFFKDDELCGTCEDEEEDEGYIPGTTPLNMAT
SPEVYDILNGEEYQPTTIVIAPQGDMKSLSSDTKQELCQALEGQTEGWESLAHALGLGIL
TSAFRLSSCPAGKLLDSYEVSGGTVRELVEGLKHIGNSSAVSLLQAVYKEPEAVHTTPQL
TGPGLCKSIQGLILGPHQEESGICDSGVETSF
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggctggagaggacccataccatacagggttcatggaacaaattgagttcagtaatgag
acaatgtggatgaacatggacccgacatatccggtcattcacaacaataatgttatgagg
acagtcgacggaccttgtctgcgaatcgtcgaacaaccaaaacagaggggcttcaggttc
cgctatggttgtgaaggcccctcccacggcggactcccaggggcctccagtgagaagaac
aggaagtcttacccacaagtgaagatctgtaactaccagggagcagcacgagtggttgtt
cagctggtgaccaactctccgaacccccatctccatgctcacagtctggtgggcaaacag
tgtgataaaggaatctgcattgctgacttgcagcccaaagatccagttatcagttttcct
aacttgggcattttgcacgtgacaaagaagaacgtaagtaaagttttggaggagaggatg
attgaggcctacaggatgggatataactatggcatatccattcatcctgaaatagatgtc
ctacagggagaagtccgcattcccagagaactcacagattctgagaggagcctgattagc
aatgcagccactcatcagtcgaaggagatggacctgagcgtggtacggctcatgttcaca
gccttcctgcccgacagtgatggaggattctcccgcagactagaaccggtcatttcagac
cccatctatgacagcaaagccccaaatgcctccaatctgaagatagtgcggatggatcgg
actgctggctgtgtgacgggaggagaggaggtctatctattatgtgacaaagtccagaaa
gatgacatccaggtgcggttttatgaagatgatgattcaggtctaacctgggaggcctat
ggggatttctcccccactgacgtccacagacagtttgccatcgtcttcaagacgcctaaa
tatcgggaccagaacctccagaagcccatctctgtgtttgtgcagctcaagaggaagtca
gacaatgaaacgagcgaacccaagccattcacctaccatccacagattatagacaaagaa
gaagtccagagaaagagacaaaagaccctgccaaacttccaggactacagcggagcagga
ggcggagctggaggcatgttcagaggaggagggggtgggtctacagcagggggcggcccc
agtggaggaggaggacatttcttccagggatatcaaaattataacaattatgggtctgga
tacaacttctcaggcatgggaggaggtgggaccaccatcaagcatacatgtcaagaacca
gtagaagacagcgatgaagatagcgacagtgatacagatgatgatcccgcttctggtgga
gtggtgcgaatctgtgcacaacctgaacctgttcccctgaatctgggtgtggcgagtgat
gacacacagcctacagaatatcttgagttagacgccacaggctgtgtgttagagtcacat
ttggctgagctagctgaaagacaagctcaagctctctttcattacgcattaagtggtgat
gctagaatgcttttggctccacagcgccccctcatgaccactcaagacgagaatggagac
acgggtttacatctgggagtgatccacagtcagacagatgccgtgcgaaatctagctcaa
gtcatctccgctctccctggagaggatgtactcaatatgaggaatgatctctaccagact
cctttgcacctagcagtgttgacgcagcagacagaggtagtcggggccttattggaggcc
aaggtagacatcacactgacagatcgccatggaaacacggcacttcacctggcggctcaa
cagaaagaggaaagcatgctgcgattgctcctaaagcacaagtcaatggcgcagttaact
agcatccccaacacagcaggtctctgtccgcttcacctggctgtaaaggcgaacagtttg
agttgtgttcgggccctcctggatggcggggcagatgtggaggttcaggagcttacgtgt
ggccgcacagcacttcatctggccacagagctgggcaacctttccctcgccggctgcctc
ctgctggagggtaacgcatgtgtagacagcgtcacctacaatggctccactcctctgcac
attgctgcaggacgagactcaactaaactgagcgcacttctaatggctgcaggagcagat
cctcataaggagaactttgaaccgctattctttaaagatgatgagctgtgtggcacatgt
gaggatgaggaggaggatgaaggctatatccctgggacaacccctctgaacatggcaact
tccccagaggtgtatgatattctcaatggagaagagtatcagcccaccaccatcgtcatt
gcaccgcaaggtgacatgaagagcttgagctctgacacaaagcaggagctgtgccaggca
ctggaggggcagacggaaggctgggagagtctggctcatgctctgggccttggtatcctg
accagcgccttcagactcagctcctgccctgctggaaagctgctggacagctacgaggtg
tctggaggaacggtgcgtgagcttgtggagggactgaagcatattgggaacagcagtgct
gtcagtttactccaggctgtgtataaggagcctgaagctgtccacaccacacctcagctc
acaggtccagggctctgtaagtccattcagggtttgatactgggccctcatcaggaggag
agtggaatatgcgacagcggggtggagacttctttctag
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