Ctenopharyngodon idella (grass carp): 127525667
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Entry
127525667 CDS
T08802
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04210
Apoptosis
cide04218
Cellular senescence
cide04620
Toll-like receptor signaling pathway
cide04621
NOD-like receptor signaling pathway
cide04622
RIG-I-like receptor signaling pathway
cide04623
Cytosolic DNA-sensing pathway
cide04625
C-type lectin receptor signaling pathway
cide04920
Adipocytokine signaling pathway
cide05132
Salmonella infection
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127525667
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127525667
04218 Cellular senescence
127525667
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127525667
04621 NOD-like receptor signaling pathway
127525667
04622 RIG-I-like receptor signaling pathway
127525667
04623 Cytosolic DNA-sensing pathway
127525667
04625 C-type lectin receptor signaling pathway
127525667
09152 Endocrine system
04920 Adipocytokine signaling pathway
127525667
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127525667
09171 Infectious disease: bacterial
05132 Salmonella infection
127525667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127525667
Transcription factors [BR:
cide03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
127525667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
127525667
NCBI-ProteinID:
XP_051774292
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All DBs
Position
14:complement(18205418..18252922)
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AA seq
932 aa
AA seq
DB search
MAGEDPYHTGFMEQIEFSNETMWMNMDPTYPVIHNNNVMRTVDGPCLRIVEQPKQRGFRF
RYGCEGPSHGGLPGASSEKNRKSYPQVKICNYQGAARVVVQLVTNSPNPHLHAHSLVGKQ
CDKGICIADLQPKDPVISFPNLGILHVTKKNVSKVLEERMIEAYRMGYNYGISIHPEIDV
LQGEVRIPRELTDSERSLISNAATHQSKEMDLSVVRLMFTAFLPDSDGGFSRRLEPVISD
PIYDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDDSGLTWEAY
GDFSPTDVHRQFAIVFKTPKYRDQNLQKPISVFVQLKRKSDNETSEPKPFTYHPQIIDKE
EVQRKRQKTLPNFQDYSGAGGGAGGMFRGGGGGSTAGGGPSGGGGHFFQGYQNYNNYGSG
YNFSGMGGGGTTIKHTCQEPVEDSDEDSDSDTDDDPASGGVVRICAQPEPVPLNLGVASD
DTQPTEYLELDATGCVLESHLAELAERQAQALFHYALSGDARMLLAPQRPLMTTQDENGD
TGLHLGVIHSQTDAVRNLAQVISALPGEDVLNMRNDLYQTPLHLAVLTQQTEVVGALLEA
KVDITLTDRHGNTALHLAAQQKEESMLRLLLKHKSMAQLTSIPNTAGLCPLHLAVKANSL
SCVRALLDGGADVEVQELTCGRTALHLATELGNLSLAGCLLLEGNACVDSVTYNGSTPLH
IAAGRDSTKLSALLMAAGADPHKENFEPLFFKDDELCGTCEDEEEDEGYIPGTTPLNMAT
SPEVYDILNGEEYQPTTIVIAPQGDMKSLSSDTKQELCQALEGQTEGWESLAHALGLGIL
TSAFRLSSCPAGKLLDSYEVSGGTVRELVEGLKHIGNSSAVSLLQAVYKEPEAVHTTPQL
TGPGLCKSIQGLILGPHQEESGICDSGVETSF
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggctggagaggacccataccatacagggttcatggaacaaattgagttcagtaatgag
acaatgtggatgaacatggacccgacatatccggtcattcacaacaataatgttatgagg
acagtcgacggaccttgtctgcgaatcgtcgaacaaccaaaacagaggggcttcaggttc
cgctatggttgtgaaggcccctcccacggcggactcccaggggcctccagtgagaagaac
aggaagtcttacccacaagtgaagatctgtaactaccagggagcagcacgagtggttgtt
cagctggtgaccaactctccgaacccccatctccatgctcacagtctggtgggcaaacag
tgtgataaaggaatctgcattgctgacttgcagcccaaagatccagttatcagttttcct
aacttgggcattttgcacgtgacaaagaagaacgtaagtaaagttttggaggagaggatg
attgaggcctacaggatgggatataactatggcatatccattcatcctgaaatagatgtc
ctacagggagaagtccgcattcccagagaactcacagattctgagaggagcctgattagc
aatgcagccactcatcagtcgaaggagatggacctgagcgtggtacggctcatgttcaca
gccttcctgcccgacagtgatggaggattctcccgcagactagaaccggtcatttcagac
cccatctatgacagcaaagccccaaatgcctccaatctgaagatagtgcggatggatcgg
actgctggctgtgtgacgggaggagaggaggtctatctattatgtgacaaagtccagaaa
gatgacatccaggtgcggttttatgaagatgatgattcaggtctaacctgggaggcctat
ggggatttctcccccactgacgtccacagacagtttgccatcgtcttcaagacgcctaaa
tatcgggaccagaacctccagaagcccatctctgtgtttgtgcagctcaagaggaagtca
gacaatgaaacgagcgaacccaagccattcacctaccatccacagattatagacaaagaa
gaagtccagagaaagagacaaaagaccctgccaaacttccaggactacagcggagcagga
ggcggagctggaggcatgttcagaggaggagggggtgggtctacagcagggggcggcccc
agtggaggaggaggacatttcttccagggatatcaaaattataacaattatgggtctgga
tacaacttctcaggcatgggaggaggtgggaccaccatcaagcatacatgtcaagaacca
gtagaagacagcgatgaagatagcgacagtgatacagatgatgatcccgcttctggtgga
gtggtgcgaatctgtgcacaacctgaacctgttcccctgaatctgggtgtggcgagtgat
gacacacagcctacagaatatcttgagttagacgccacaggctgtgtgttagagtcacat
ttggctgagctagctgaaagacaagctcaagctctctttcattacgcattaagtggtgat
gctagaatgcttttggctccacagcgccccctcatgaccactcaagacgagaatggagac
acgggtttacatctgggagtgatccacagtcagacagatgccgtgcgaaatctagctcaa
gtcatctccgctctccctggagaggatgtactcaatatgaggaatgatctctaccagact
cctttgcacctagcagtgttgacgcagcagacagaggtagtcggggccttattggaggcc
aaggtagacatcacactgacagatcgccatggaaacacggcacttcacctggcggctcaa
cagaaagaggaaagcatgctgcgattgctcctaaagcacaagtcaatggcgcagttaact
agcatccccaacacagcaggtctctgtccgcttcacctggctgtaaaggcgaacagtttg
agttgtgttcgggccctcctggatggcggggcagatgtggaggttcaggagcttacgtgt
ggccgcacagcacttcatctggccacagagctgggcaacctttccctcgccggctgcctc
ctgctggagggtaacgcatgtgtagacagcgtcacctacaatggctccactcctctgcac
attgctgcaggacgagactcaactaaactgagcgcacttctaatggctgcaggagcagat
cctcataaggagaactttgaaccgctattctttaaagatgatgagctgtgtggcacatgt
gaggatgaggaggaggatgaaggctatatccctgggacaacccctctgaacatggcaact
tccccagaggtgtatgatattctcaatggagaagagtatcagcccaccaccatcgtcatt
gcaccgcaaggtgacatgaagagcttgagctctgacacaaagcaggagctgtgccaggca
ctggaggggcagacggaaggctgggagagtctggctcatgctctgggccttggtatcctg
accagcgccttcagactcagctcctgccctgctggaaagctgctggacagctacgaggtg
tctggaggaacggtgcgtgagcttgtggagggactgaagcatattgggaacagcagtgct
gtcagtttactccaggctgtgtataaggagcctgaagctgtccacaccacacctcagctc
acaggtccagggctctgtaagtccattcagggtttgatactgggccctcatcaggaggag
agtggaatatgcgacagcggggtggagacttctttctag
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