Ctenopharyngodon idella (grass carp): 127525704
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Entry
127525704 CDS
T08802
Name
(RefSeq) PDZ and LIM domain protein 3b isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127525704
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127525704
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
127525704
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
127525704
NCBI-ProteinID:
XP_051774435
LinkDB
All DBs
Position
14:complement(6522071..6534926)
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AA seq
376 aa
AA seq
DB search
MPQNVVLDGPAPWGFRLSGGKDFNQPLTITRVTPGSKASRVNLCPGDIILAIQGVSTDGM
THAEAQNKIKDSTNQLFLKIERPETKMWSPQVIEEGKVNPFKINLEAEKQEYKPIGTGHN
RRAQPFVAAASLDDKTQVVSSAYNTPIGLYSQDNIQDALQGQIRGLVHEKPEGDSTSQML
VGNVARMPGIPSAGSKAAPSAQYNSPIALYSADNVSNTMQQAQMSTVVRQASPSPKPLTS
IEDSHVYRMLQEDHEQPHEPRQSGSFKALQDYVESDGSRPMVTRSVKAPVTKPQAATSSL
QKLPLCDKCGTGIVGPVVKARDKYRHPACFVCSDCGVNLKQKGYFFVEGQMYCEGHARMR
MTPPEGHDLVTVYPTA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgccacagaacgtggtactggacgggccagcaccttggggatttcggctttcaggaggc
aaagacttcaaccagccgctgaccataactcgggtgactccaggcagtaaggcatctcgg
gtcaacctgtgcccaggagacatcatcctggctatccagggagtgtccacagacggtatg
actcacgctgaagctcagaacaagatcaaagactccaccaatcagcttttcctcaagata
gagaggccagaaactaaaatgtggtcacctcaggttatagaagaggggaaagtaaaccca
ttcaaaatcaatttggaggcagagaagcaagagtataaacctattggcacaggtcataac
agaagagcacagccctttgtggctgccgccagtctggatgacaaaacacaggtggtgagc
tccgcctacaacactcccataggcctctactctcaagataacatccaggacgccctgcaa
ggacagatccggggtctggtgcatgaaaagcctgagggtgacagtacatcccagatgctg
gtgggaaatgtagctaggatgcctggcatcccatcggctgggtctaaggcagctccttct
gcacagtataactcccctattgcattatactcagcagacaatgtttcaaatacaatgcag
caggctcagatgtccactgtagtcaggcaggcatcgcccagccctaaacccctgacgtcc
attgaagactcccatgtgtaccgtatgctccaagaagatcacgagcagccacatgaacca
cgtcagtccggatcatttaaggccctgcaagactatgttgagagtgatggctcaaggccc
atggtgactagaagtgtaaaagccccagtgacaaaaccacaagcggccacatcctcactg
cagaagctgcctctctgtgataaatgtggcaccggcattgtaggaccggttgtgaaagct
cgggacaagtaccgccatccagcctgtttcgtgtgctcagactgtggtgtgaacttgaag
cagaagggctacttctttgtggagggacagatgtactgtgaaggccacgctcgaatgcga
atgaccccgcctgagggacatgatctagttactgtatatcccactgcttag
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