Citrobacter sp. CRE-46: AN232_04465
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Entry
AN232_04465 CDS
T05520
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cie
Citrobacter sp. CRE-46
Brite
KEGG Orthology (KO) [BR:
cie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cie03032
]
AN232_04465 (gyrB)
03400 DNA repair and recombination proteins [BR:
cie03400
]
AN232_04465 (gyrB)
Enzymes [BR:
cie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AN232_04465 (gyrB)
DNA replication proteins [BR:
cie03032
]
Prokaryotic type
DNA Topoisomerases
AN232_04465 (gyrB)
DNA repair and recombination proteins [BR:
cie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AN232_04465 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
GyrB_hook
Toprim
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
AWS94530
LinkDB
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Position
892677..895091
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AA seq
804 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIV
VTIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELVIRREGKVHQQTYVHGVPQAPLAVTGETEVTGTQVRFWPSHETFTNVT
EFEYDILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLSEY
LLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQDVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQISIALDGATLHTNASAPALSGESLEKLVSEYNATQKMIGRMERR
FPKALLKELVYQPTLPEADLANEQNVTRWVNALITELNEKEQHGSLWKFDVHHNAEQNLF
EPIVRVRTHGVDTDYVLDHEFVTGGEYHRICTLGEKLRGLIEDDAFIERGERRQPVASFE
QALEWLQKESRRGLAIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctccagtatcaaagtcctgaaagggctggatgcggtgcgt
aagcgcccgggtatgtatatcggcgacacggatgacggcaccggtctgcaccacatggta
ttcgaggtggtagataacgctatcgacgaagcgctcgcgggtcactgtaaagatatcgtg
gtaacgattcacgcggacaactccgtgtctgttaccgatgatggccgtggtatcccaacc
ggtattcacccggaagagggcgtttcggcggcggaagttatcatgactgttctgcacgca
ggcggtaaattcgatgataactcctataaagtttccggtggtttgcacggcgtaggtgtc
tccgtcgttaacgccctgtcgcagaaactggagctggtgattcgtcgtgaaggcaaagtg
catcagcaaacttacgtgcatggtgtgccgcaggcgccgctggcggtaacaggcgaaacg
gaagtaacgggtactcaggtccgtttctggccaagccatgaaaccttcactaacgtgacc
gagttcgaatacgacattctggcgaagcgtctgcgcgagctgtcattcctgaactctggc
gtctctattcgtctgcgcgataagcgcgacggcaaagaagatcatttccactacgaaggc
ggcatcaaggcgtttgttgaatatctcaacaaaaataaaacgccgatccacccgaatatc
ttctacttctccaccgaaaaagacggtatcggcgttgaagttgcgctgcagtggaacgac
ggcttccaggaaaatatctactgcttcaccaacaacattccgcagcgtgacggcgggact
caccttgcaggcttccgcgcggcgatgacccgtaccctgaacgcctacatggacaaagaa
ggctacagcaaaaaagccaaagtcagcgctaccggtgacgatgcccgtgaaggcctgatt
gcggtggtttccgtgaaagtgccggacccgaaattctcctcgcagaccaaagacaaactg
gtctcctctgaggtgaaatcggcggttgaacagcagatgaacgaactgctgagcgaatac
ctgctggaaaacccgtctgacgcgaaaatcgtcgtcggcaagattatcgatgcggcccgt
gcccgtgaagcagcacgtcgcgcgcgtgaaatgacccgtcgtaaaggcgcgctggactta
gccggtctgccgggcaagctggcggactgtcaggaacgtgacccggcgctgtccgaactg
taccttgtggaaggggactccgcgggcggttctgcgaagcaggggcgtaaccgtaaaaac
caggcgattctgccgctgaagggtaaaatccttaacgtcgagaaagcgcgtttcgacaaa
atgctctcctctcaggatgtggcgacgctgattaccgcgctcggctgcggcattggtcgt
gacgagtacaacccggacaaactgcgttatcacagcatcatcatcatgaccgatgcggac
gtcgacggttcgcatatccgtacgctgctgttgaccttcttctatcgtcagatgccggaa
atcgttgaacgcggccacgtttacattgcgcagccgccgctgtacaaagtgaagaaaggc
aagcaggaacagtacattaaagatgacgaagcgatggatcagtaccaaatttctatcgct
ctggatggcgcaacgctgcacaccaacgccagtgcgcctgccctttcaggtgagtcgtta
gagaaactggtttctgaatacaacgcgacgcagaaaatgattggccgtatggaacgtcgt
ttcccgaaagcgctgctgaaagagctggtttatcaaccgacgctgccggaagctgatttg
gcgaacgaacagaacgttacccgttgggttaacgcgctgattaccgagctgaacgaaaaa
gaacagcacggtagcctgtggaagtttgatgttcaccataacgcagagcagaatctgttt
gagccgattgtacgcgtacgtactcacggtgtggataccgactatgtgctggatcacgag
tttgtgaccggtggcgagtaccatcgtatttgcacgctcggtgagaagttgcgcgggctg
atcgaagacgatgcgtttatcgaacgtggcgagcgtcgccagccggtggccagctttgag
caggcgctggaatggctgcagaaagagtctcgtcgcggtctcgctatccagcgttataaa
ggtctgggcgagatgaacccggaacagctgtgggaaacgaccatggatccggaaagccgt
cgcatgttgcgcgttactgtgaaggatgcgattgccgctgaccagctgttcaccaccctg
atgggcgatgccgtcgaaccacgccgcgcatttatcgaagaaaacgccctgaaagcggcg
aacatcgatatctga
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