Citrobacter sp. CRE-46: AN232_09290
Help
Entry
AN232_09290 CDS
T05520
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cie
Citrobacter sp. CRE-46
Pathway
cie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AN232_09290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cie03400
]
AN232_09290
Enzymes [BR:
cie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AN232_09290
DNA repair and recombination proteins [BR:
cie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AN232_09290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
NLE
Motif
Other DBs
NCBI-ProteinID:
AWS95396
LinkDB
All DBs
Position
1838166..1841537
Genome browser
AA seq
1123 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLAQKFGIAANI
DFPLPASFIWDMFVRVLPDIPKESAFSKQSMSWKLMTLLPQLLDNDDFALLRHYLTDDTD
KRKLFQLSSRAADLFDQYLVYRPDWLTQWEAGRQIEGLGEAQAWQAPLWKALVEYTAELG
QPRWHRANLYQRFIHTLENASECPQGLPSRVFICGISALPPVYLQALQALGKHIDIHLLF
TNPCRYYWGDIKDPAWLAKLLARQRRHSFEERHLPLFRDTQNAAGLFNSDGEQDVGNPML
ASWGKLGRDYIYLLSELENSQELDAFVDITPDNLLHNIQSDILELQSRAVAGVTLDEYSR
SDNKRLLDVNDTSVTFHVCHSPQREVEILHDRLLAMLEADPTLTPRDIIVMVADIDSYSP
FIQAVFGSAPADRYLPYAISDRRARQSHPVLQAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFNIDEDGLRYLRLWVNESGIRWGIDDDNVRELELPPTGQHTWQFGLTRMLLGYAMESA
QGEWQSVLPYDESSGLIAELVGHLASLLMQLNLWRRGLAQERPLEEWLPVCRDMLNDFFL
PDADTEAAMTLIEQQWQAIITEGLGAEYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPMRGDRSRRDDDRYLFLEAL
ISAQQTLYISYIGRSIQDNSERFPSVLVQELMDYIGQSHYLPGDESLTCDQSEARVKAHI
TCLHTRMPFDAQNYQPGEQQSYAREWLPAASLSGKAHTDFVQPLPFEMPATLTLETLQRF
WAHPVRAFFQMRLQVNFRSEESEIPETEPFVLEGLTRYQLNQQLLNTLVEENDAERLFRR
FRAAGVLPYGSFGEILWDTQRQEMQSLAERIIACRQPCQSMEIDLICNGVQITGWLPQVQ
EDGLLRWRPSLISIAQGVQLWLEHLVYCASGGTGESRLFLRKDGEWRFPPLAAEQALLYL
SQLIEGYREGMSSPLLVLPESGGAWIKTCYDAANDAMLEDDDTLQKARSKFLQAYEGNMM
VRGEGDDIWYQRLWRQLDAETLERIVLQSQRYLLPIFRFNQSR
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctaccactccaatcgtctggatgtgctggaagcgttaatggagtttatc
gttgagcgcgagcggttggacgatccctttgagccggaaatgatcctggtgcaaagcacc
ggtatggcgcagtggctacagatgacccttgcacagaaatttggtattgccgccaacatc
gatttcccgctacccgcgagttttatctgggatatgtttgtgcgcgtgctgccggatatc
ccgaaagagagcgcgtttagcaaacagagcatgagctggaagttaatgactctgctgccg
caattgctggataacgatgacttcgcactgctgcgacactatctgacggacgacaccgat
aaacgtaagctgtttcaactctcctctcgcgcggcggaccttttcgatcagtatttagtt
tatcgccctgactggttaacgcagtgggaagcggggcgccagattgaaggactcggcgag
gctcaggcatggcaggcgccgttgtggaaagcgctggtggaatacaccgcagaactgggc
caaccgcgctggcatcgcgccaatttatatcagcgatttattcacaccctggaaaatgcg
tctgaatgtccgcaggggctgccttctcgcgtctttatttgcggaatttcggcgctaccg
ccggtttacctgcaggccttgcaggcgttgggtaagcacattgatattcatctgctgttt
accaacccttgtcgctactattggggcgacattaaagatcccgcctggctggcaaagctg
ttggcgcgtcagcgtcggcacagttttgaagaacgtcacctgccgctgtttcgtgatact
cagaatgcggcaggattgtttaacagtgatggtgagcaggatgtaggcaacccgatgctg
gcctcgtggggtaagttgggacgtgattatatttatctgctttcagaactggaaaacagc
caggagctggatgcgtttgtcgatataaccccagacaatcttttgcataacattcagtcg
gatattctcgagttacaaagccgggccgtggcgggcgttacgctggacgagtattcccgg
agcgacaacaaacgactgcttgatgtgaacgacaccagcgtgactttccatgtctgccat
agccctcagcgtgaagtggaaattcttcatgaccgactgctggcaatgctggaagcagat
cccacgctgacgccgcgcgacattatcgtgatggtggcggatatcgacagctacagcccg
ttcattcaggcggtttttggcagcgcgccagccgaccgttacttaccctatgcgatttcc
gaccgtcgggcgcgtcagtctcatcccgtcttgcaggcctttatcagtctgctgtcgctg
ccggatagccgttttgtctctgaggatgtgctggcattactcgatgtacccgttctggcg
gcacgtttcaatattgatgaagatggtctgcgctatcttcgtttgtgggtcaatgaatca
ggtattcgctggggaattgacgacgataacgtgcgtgagctggaacttccgccaacgggt
cagcatacctggcaatttggtttaacgcgcatgctgctcggctatgcgatggaaagcgcc
caaggcgagtggcaatcggtattgccctatgatgagtcgagcggtttgattgccgaactg
gtagggcatctggcctcgttgctgatgcagcttaatctctggcgtcgaggattggcgcag
gagcgcccgctggaagagtggctgcctgtttgtcgggacatgcttaatgatttcttcctg
ccggatgcggataccgaagcggcgatgacgctgattgaacagcagtggcaggccattatt
actgaaggactgggggctgagtatggcgatgccgtaccgctttccttgctacgtgatgag
ctggcgcagcgtctcgaccaggaacgcattagccagcgcttcctggcggggcccgttaac
atttgtacgctgatgccgatgcgctctattccttttaaggttgtatgcctgctgggcatg
aacgatggcgtttatccgcgtcagcttgcgccgctgggctttgatctgatgagtcaaaaa
ccgatgcggggcgatcgcagccgtcgcgatgatgaccgttatctgttcctcgaagcatta
atttcggcgcagcaaacgctctacatcagctacattggccgctcaattcaggataacagc
gaacgcttcccgtcggtattggtgcaggaactgatggattacatcgggcaaagccactat
ttgccgggcgacgaatcgttgacctgcgatcaaagcgaggcccgggtaaaagcgcacatt
acctgtctgcatacccgcatgccttttgacgcacaaaactatcagcccggcgaacagcaa
agctacgcccgggagtggctgcctgcggcgagcctgtcaggaaaagcgcacacggatttt
gtgcagcctctcccctttgaaatgccagccacgttaacgctggaaacgctacagcgattt
tgggctcatccggtacgggccttttttcagatgcgtttgcaggtaaactttcgttctgaa
gaaagtgagatcccggaaacagaaccttttgttctggaaggattaactcgctatcagctt
aatcagcaattgcttaacacgctggttgaagagaacgatgctgaacgactgtttcgccgt
tttcgtgcggcaggcgtgctgccctatgggtcatttggcgaaattctgtgggatacgcag
cgtcaggagatgcagtcgctggctgaacgcattattgcctgccgtcagccttgccagagc
atggagattgatctcatctgtaacggtgtgcaaatcaccggttggctgccgcaggtgcaa
gaggacggtttgttgcgctggcgcccatcattaataagcattgcccagggagtgcaactt
tggctggaacatcttgtctattgtgccagtggcggtacgggagagagtcggttgttcctg
cgcaaagacggggaatggcgtttccctccactggcggcagaacaggcgctgctgtatttg
tcgcagctcattgagggatatcgggaaggcatgtcgtcgccattgctggtattaccggaa
agcggcggcgcatggataaaaacctgttatgacgctgcaaatgatgccatgttagaggac
gacgatacgctgcaaaaagcgcgcagtaagtttttgcaggcttatgaaggcaacatgatg
gttcgtggcgaaggcgatgatatctggtatcaacgcctgtggcgtcaactggatgccgag
acgctggaacgcattgttttacagtcacagcgctatctgttaccgatttttcgctttaac
cagtcccgatga
DBGET
integrated database retrieval system
