Citrobacter sp. CRE-46: AN232_10685
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Entry
AN232_10685 CDS
T05520
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
cie
Citrobacter sp. CRE-46
Brite
KEGG Orthology (KO) [BR:
cie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cie03009
]
AN232_10685
Enzymes [BR:
cie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AN232_10685
Ribosome biogenesis [BR:
cie03009
]
Prokaryotic type
rRNA helicases
AN232_10685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AWS95639
LinkDB
All DBs
Position
complement(2153573..2154901)
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AA seq
442 aa
AA seq
DB search
MTVTTFSELELDESLLDALQEKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKNTHLDIATITGGVAYMNHM
EVFSENQDIVVATTGRLLQYIKEENFDCHAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEDPVEVSADPSTRERKKIHQFYYRADDIEHKTALLI
HLLKQPEATRSIVFVRKRERVHELAGWLRQAGINNCYLEGEMVQIKRNEAIKRLTDGRVN
VLVATDVAARGIDIPDVSHVFNYDMPRSGDAYLHRIGRTGRAGRKGTAISLVEAHDHLLL
GKASRYIDEPLKARVIDELRPTTRAPSEKSNGKPSKKVLAKRAEQKAKEKEKPRVKKRHR
DAKNIGKRRKPSGTAPQQSDKE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagccttctggatgccctccag
gaaaaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgat
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcatatttgctg
ccagcgttgcagcacctgctcgacttcccgcgcaaaaaatctggcccaccgcgcatttta
attctgacgccaacgcgcgaactggcgatgcaggttgccgaccacgcccgtgaactggcg
aagaatacgcatctggatatcgccacaattaccggcggcgtggcttacatgaaccatatg
gaagtctttagcgaaaaccaggatatcgtggtcgccaccaccggtcgcctgctgcaatac
atcaaagaagagaatttcgactgccacgcggttgaaacgctgatcctcgatgaggcagac
cgtatgctggacatgggctttgcccaggacatcgaacatatcgccggtgaaacccgctgg
cgtaagcagacgatgttattctctgccacgctggaaggcgacgcgattaaagattttgcc
gagcgcctgctggaggatccggttgaggtttcggcggatccctcgacccgcgaacgcaag
aagatccatcaattttactaccgtgccgatgacatcgagcacaaaacggctctgttgatc
catctgttaaaacagccggaagcgacccgttcgattgtttttgtacgtaagcgtgagcgt
gtgcacgagctggcaggctggctgcgccaggctggcattaataactgctatctcgaaggc
gagatggtacagatcaagcgtaacgaagcgatcaaacgcctgaccgatggtcgtgtgaac
gtactggttgcgaccgatgttgccgctcgcgggatcgacattcctgatgttagccacgtg
tttaactacgacatgccgcgcagtggtgatgcctatctacaccgcattggccgtaccggc
cgcgctggccgtaaaggtaccgcgatttctctggttgaagcgcacgaccacctgctgctt
ggtaaagcgagccgctatatcgacgaaccgctgaaggcgcgcgttattgacgaactgcgt
ccgacaactcgcgcgccaagtgagaaatctaacggcaagccgtccaagaaagtgctggcg
aagcgcgccgagcaaaaagccaaagaaaaagagaaaccgcgcgtgaagaaacgtcaccgc
gacgccaaaaatatcggcaaacgtcgtaagccgagcggaacggctccccagcagtccgac
aaagagtaa
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