Citrobacter sp. CRE-46: AN232_17325
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Entry
AN232_17325 CDS
T05520
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
cie
Citrobacter sp. CRE-46
Brite
KEGG Orthology (KO) [BR:
cie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cie03009
]
AN232_17325
Enzymes [BR:
cie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AN232_17325
Ribosome biogenesis [BR:
cie03009
]
Prokaryotic type
rRNA helicases
AN232_17325
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
AWS96840
UniProt:
A0A2Z3X7S8
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All DBs
Position
3487728..3489101
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AA seq
457 aa
AA seq
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MTAFSTLNVLPAAQLENLNELGYLEMTPVQAAALPAILAGRDVRVQAKTGSGKTAAFGLG
LLQHIDAALFQTQSLVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQ
HAPHIIVATPGRLLDHLQKGTVSLEALNTLVMDEADRMLDMGFSDAIDEVIRFAPASRQT
LLFSATWPEAIAAISGRVQKDPLTIEIDTVDALPAIEQQFFETSSHGKIPLLQKLLSQHQ
PASCVVFCNTKKDCQAVCDALNAAGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDV
AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANILAEML
QLKLNWLPAPGNGSILPLNAEMATLCIDGGKKAKMRPGDVLGALTGDIGLAGADIGKIAV
HPAHVYVAVRQTVAHKAWKQLQNGKIKGKTCRVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgctttttcaaccctgaatgttttacctgccgcccaactcgagaacctcaacgag
ctgggctaccttgaaatgacgcctgtccaggctgctgcgttaccggcaatcctggcgggg
agggatgttcgcgtgcaggctaaaaccggcagtggcaaaacggctgcttttggtctgggg
ttgttgcagcatattgatgccgcgctgtttcagacgcagtctctggtgctgtgcccaacg
cgtgagcttgccgaccaggtggcaggggaactgcgtcgtttagcgcgctttctgcccaat
accaagatcttaaccctgtgcggcggccagccctttggcgcacagcgtgactccctgcaa
catgcgccacatattattgtcgccacgccggggcgtttacttgaccacctgcaaaaaggc
accgtttctctggaggcgctgaatacgctggtgatggatgaagccgaccgtatgctggat
atggggtttagcgacgcgattgatgaggtgatccgctttgcgcctgcatcacgtcagacc
ttgcttttttctgcgacctggccggaggcgattgccgccatcagcggccgggtacagaaa
gatccgctaacgatcgaaattgatacggttgatgcgctgccagccattgaacagcagttt
tttgaaacgtccagccacggcaaaattccgttgctgcaaaaattgctcagccagcaccag
cctgcatcctgtgtggttttttgtaataccaaaaaagattgtcaggccgtatgcgatgca
ctgaatgcggcggggcaaagcgcactctcattgcatggcgatcttgaacagcgcgatcgc
gatcagacgctggtacgttttgctaacggcagcgcacgtgtactggtcgctaccgatgtg
gccgcgcgtggcctggatatcaagtcgctggaactggtggttaatttcgaactggcgtgg
gatccggaagttcatgtccatcgtattggccgtaccgctcgcgctggcaacagcggtctg
gcgattagcttctgcgcgccggaagaagcgcaacgtgccaatatcctggctgaaatgctg
cagctaaaactgaactggttgcctgcgccgggcaatggttcaattctgccgctaaacgct
gagatggccacgttatgcattgatggcggtaaaaaggctaaaatgcgtcccggcgatgtt
ctgggcgctctgaccggtgatattggtctggctggcgctgatatcggcaaaatcgccgtc
catccggcgcatgtttacgtcgctgttcgccagactgtggcgcataaggcatggaaacaa
ttgcaaaacggtaagattaaaggcaagacctgccgcgttcgtttattgaaataa
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