Citrobacter sp. CRE-46: AN232_22340
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Entry
AN232_22340 CDS
T05520
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cie
Citrobacter sp. CRE-46
Pathway
cie03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AN232_22340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cie03019
]
AN232_22340
Enzymes [BR:
cie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AN232_22340
Messenger RNA biogenesis [BR:
cie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AN232_22340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AWS97749
UniProt:
A0A2Z3XCM5
LinkDB
All DBs
Position
complement(4439726..4441066)
Genome browser
AA seq
446 aa
AA seq
DB search
MSFDSLGLNPEILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QHLVTHQPHGKSRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDVLIATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
EKLLKKEIPRIATPGYEPDPSIKAEPIQNGRQQRGGGRGQGGAGRGQQPRRQDGGAPKAK
PRSGEGKPAGDKPRPPRRPRRPSSAQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggtttgaaccctgagattttacgtgccgttgccgagcagggt
taccgtgaacctacccctattcagcagcaggcgatccccgccgtgctggaaggccgcgat
ctgatggccagcgcccagaccggtacggggaaaacagcaggttttaccctgccgttgttg
cagcatcttgtgactcatcagccgcatggtaaaagccgtcgtccggttcgtgcgctgatc
ctcacgccgactcgcgagctggcggcccagattggcgaaaacgtacgtgattacagtaag
tatctcaatattcgctcgctggtggttttcggcggtgtcagcattaacccacagatgatg
aagctgcgtggcggcgtagatgtgctgattgccaccccgggtcgtttgctcgatctggaa
caccagaatgcggtgaaactggatcaggttgagatcctggtgctggacgaagctgaccgc
atgctggatatgggctttattcatgacattcgtcgcgttctggcgaaactgccggcaaaa
cgccagaacctgctgttctcggcaacgttctctgacgatattaaatcgctggccgaaaag
ctgctgcacaacccgctggaaattgaagtggcgcgtcgtaataccgcgtccgagcaggtg
actcagcatgtgcatttcgtggataaaaaacgcaaacgtgaactactttcgcagatgatt
ggtcagggcaactggcagcaggtgctggtgtttacccgtaccaaacacggtgcgaaccat
ctggcggaacaactgaataaagacggcattcgcagcgcggcgatccacggtaacaaatct
cagggggcgcgtacgcgtgcgctggccgattttaaatccggtgatattcgcgtgctggtg
gcgaccgatattgccgcgcgcgggctggatattgaagagctgccgcacgtggtgaactac
gagttgccaaacgtcccggaagattacgtgcaccgtattggtcgtaccggccgcgccgcc
gccaccggcgaagcgttgtctctggtgtgcgtcgatgaacacaaactgttgcgtgatatc
gagaagctgctgaaaaaagagatcccgcgtattgcaacgccaggctacgagccagacccg
tctatcaaagctgagccgattcagaacggtcgccagcagcgtggcggcggtcgcggccag
ggcggagcaggacgtggccagcagccgcgtcgtcaggatggcggtgcgccaaaagcgaaa
ccgcgtagcggcgaaggcaaaccggcaggcgataaacctcgtccaccgcgccgtccgcgc
agaccgtcttcagcgcagtaa
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