Citrobacter sp. CRE-46: AN232_25540
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Entry
AN232_25540 CDS
T05520
Symbol
ldcC
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
cie
Citrobacter sp. CRE-46
Pathway
cie00310
Lysine degradation
cie01100
Metabolic pathways
cie01110
Biosynthesis of secondary metabolites
cie01120
Microbial metabolism in diverse environments
Module
cie_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
cie00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
AN232_25540 (ldcC)
Enzymes [BR:
cie01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
AN232_25540 (ldcC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
PKcGMP_CC
Motif
Other DBs
NCBI-ProteinID:
AWS98325
UniProt:
A0A2Z3XC53
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All DBs
Position
complement(5090226..5092364)
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AA seq
712 aa
AA seq
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MNIIAIMGPHGVFYKDEPIKELERALQQQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLDLCSDINQLNEYLPLYAFINTHSTMDVSAHDLRMALWFFEYALGQSEDIATRIRQY
TSEYLDNITPPFTKALFTYVKEGKYTFCTPGHMAGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPTGSTLLI
DRNCHKSLAHLLMMSDVVPIWLKPTRNALGILGGIPRREFSRASIESKVEETPQAQWPVH
AVITNSTYDGLLYNTNWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIF
ETQSTHKMLAALSQASLIHIKGDYDEDTFNEAFMMHTSTSPSYPIVASIETAAAMLRGNS
GKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPERVDEAECWPVAPGEDWHGFIDAD
ADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTRAMGLLRGLTEFKRSYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHRLIRQH
DLSGLMLRAFDTLPEMKMTPHQAWQRQIKGEVETVALDQLVGRVSANMILPYPPGVPLLM
PGEMITEKSRAVLDFLLMLCSVGHHYPGFETDIHGAKLGEDGVYRVRVLKMA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcattgccatcatgggaccgcatggcgtcttttataaagatgagcccatcaag
gaacttgagcgtgcgctacaacagcaggggtttcagattatctggccgcagaatagcgtt
gacctgctgaagtttatcgaacataacccgcgaatttgcggcgtcatttttgactgggat
gaatacagtctggatctgtgcagtgacatcaaccagctcaacgaatatcttccgctttac
gcctttattaatacccattcgacgatggatgtcagcgcccatgacctgcgcatggcgctg
tggttttttgagtatgcgctgggccagtctgaagacattgccacccgcatccgccagtac
accagcgaatatctggataacattacgccccctttcaccaaagcgctgtttacctatgtg
aaggaaggaaagtataccttttgcacgcccggtcatatggcgggaacggcgtaccagaaa
agcccggtcggctgcctgttctatgatttctttggcggtaatacgctgaaagccgatgtc
tccatttcagtgaccgagctgggctcgctgctggatcataccggcccgcacctggaagcg
gaggagtatatcgcgcgcacttttggcgccgagcagagctatatggtgaccaacggcacg
tccacctccaataaaattgttggtatgtacgccgcacccacgggcagtacgctgttgatt
gaccgcaactgtcataagtcgttggcgcatttgctgatgatgagcgatgtggtgccaatc
tggttgaagccgacgcgtaatgcgttgggtattctgggcggtatcccccgtcgggaattt
agccgggcaagcatcgaaagcaaggtagaggagacccctcaggcgcaatggccggtgcat
gcggtgatcaccaactccacctatgacggcctgctgtataacaccaactggatcaaacaa
acgctggatgtgccctctatccattttgattcagcctgggtgccatatacccattttcat
ccgatctatcaggggaaaagcgggatgagcggtgagcgcgtgccggggaaggtgattttt
gaaacccagtccacccacaagatgctggcggcgttgtcacaggcttctttgatccacatt
aagggcgattacgacgaagacacctttaacgaagcctttatgatgcacacatccacttcg
ccgagttacccgattgttgcctcgatagaaaccgcagcggccatgctgcgtggcaattcc
ggtaagcggttaatcaatcgttcggtggagcgggcgctgcattttcgtaaagaagtgcag
cggttgcgtgaagagtcggatggctggttttttgatatctggcaaccagaaagggtggat
gaagcagaatgctggccggtagcgcccggtgaagactggcacggatttatcgatgctgac
gccgaccacatgtttcttgacccggtgaaagtcactattctgacgccggggatggatgaa
cagggaaatatgagtgaagaggggattcctgccgcgctggtggcgaaattccttgatgaa
cgcggcgtggttgtcgagaaaacgggaccgtataatctgttgttcctgttcagcatcggc
attgataaaacccgggcgatgggcctgctgcgcggactgacggaatttaagcgttcgtac
gatctgaatttacgcgtgaaaaacatgcttccggatctgtatgctgaagatcctgatttt
tatcgtaatatgcgcattcaggatctggcgcaggggatccataggcttattcgccagcac
gatctttccgggctgatgctgcgggcatttgataccttaccggaaatgaaaatgacgccg
catcaggcctggcagcggcagatcaaaggtgaggttgaaacggtggcgctcgatcaactg
gtggggcgcgtttccgccaatatgatcctgccttaccctcccggcgtaccgctcttgatg
cctggtgaaatgatcacggaaaaaagccgggctgtactcgatttcctgctgatgctgtgc
tccgtgggccatcattatcctggatttgaaaccgatatccatggcgctaaactgggtgag
gatggcgtgtatcgtgtgagagtcttaaaaatggcataa
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