Citrobacter sp. CRE-46: AN232_25550
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Entry
AN232_25550 CDS
T05520
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cie
Citrobacter sp. CRE-46
Pathway
cie03030
DNA replication
cie03430
Mismatch repair
cie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AN232_25550
03430 Mismatch repair
AN232_25550
03440 Homologous recombination
AN232_25550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cie03032
]
AN232_25550
03400 DNA repair and recombination proteins [BR:
cie03400
]
AN232_25550
Enzymes [BR:
cie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AN232_25550
DNA replication proteins [BR:
cie03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AN232_25550
DNA repair and recombination proteins [BR:
cie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AN232_25550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AWS98327
UniProt:
A0A2Z3XEB5
LinkDB
All DBs
Position
complement(5093436..5096918)
Genome browser
AA seq
1160 aa
AA seq
DB search
MSEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA
GIKPIVGADFHVRSELLADELTQLTVLAANNTGYQNLTLLISKAYQRGYGAEGPVIDRDW
LVELKEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEAHFPNSYFLELIRTGRQDEEN
YLHAAVELAERRGLPVVATNDVRFLETGDFDAHEIRVAIHDGFTLDDPKRPRNYSAQQYM
RSEDEMCELFSDIPEALQNTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVAKSKEGL
EQRLAFLFPDPEERARRRPEYDERLDVELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEQGLHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHECLKPVLEPTYGIILYQEQVMQIAQELSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGAKKRGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNEGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLNDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYANCTPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGHRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMMAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccacgtttcgtccacctccgggtgcacagcgactactccatgatcgatggg
ctggcgaaaaccgggccgctggtgaagaaggcggccgcgttaggcatgcctgcgctggcg
atcaccgattttaccaacctgtgtggtctggtgaagttttacggagcgggtcacggcgcc
ggtattaagcctattgtaggcgcagattttcatgtccgcagtgaactattggctgatgaa
ctcacgcaactcaccgtactggccgctaacaataccggctatcagaacctgacgttattg
atatcaaaagcctatcagcgcggttatggcgcagaagggccggttatcgaccgcgactgg
ctggtcgagctaaaagaaggtttgattttgctctccggcggccgcatgggcgacgtcgga
cgtagcttgttgcgcggtaatagcgccctggttgacgaatgcgtggcgttttacgaagcg
cattttcccaatagctacttccttgagctgatccgtaccggcagacaagatgaagaaaac
tatctgcatgccgcggtagaactggctgaaaggcgtggtttgccggtggtggcgaccaac
gatgttcgcttcctggaaaccggcgatttcgacgcgcatgaaatccgtgtggcgatccac
gacgggttcacccttgacgaccctaaacgcccgcgtaactactccgcgcagcagtatatg
cgtagcgaagacgagatgtgcgagctgttctccgatatcccggaggcgctgcaaaacacc
gtcgaaattgccaaacgctgtaacgtcacggtgcgtttgggtgagtatttcttgccacag
ttcccgaccggcgatatgaccaccgaggatttcctcgtggcgaagtcgaaagaggggctg
gaacagcgactggcgttcctgttcccggatccggaagagcgcgccaggcgccgtccggaa
tatgatgaacgtctggatgttgagctacaggttatcaaccagatggggttcccgggctac
ttcctgatcgttatggaatttatccagtggtcgaaggataacggcgtaccagtaggtccg
ggacgtggttccggcgcaggctcgctggtggcctatgcgctaaaaattaccgacctggat
ccgctggaatttgacctgctgttcgaacgtttcctgaacccggaacgtgtctcaatgccc
gacttcgacgttgacttctgtatggagaaacgcgaccaggttattgaacacgtggcggat
atgtacggtcgtgatgcggtttcgcagattattactttcggtacgatggcggcaaaagcg
gttatccgagacgtgggtcgcgtgctggggcacccgtacggcttcgtggatcgtatttcg
aaactggtgccgcccgatccgggcatgacgctggcgaaagccttcgaagctgaaccgcaa
ctgccggaaatctatgaggcagatgaagaggttaaagcgctgatcgatatggcgcgtaag
ctggaaggcgtcacgcgtaacgccggtaagcacgccggtggcgtggttatcgctccgacc
aaaattaccgattttgcgccgctatactgcgatgaacaggggctgcacccggttactcag
tttgataagaacgacgtggaatacgccggcctggtgaagttcgacttcctggggctgcgt
acgctgaccatcatcaactgggcgctggagatgatcaacgcccgccgtgaaaagaacggc
gagccgccgctggatatcgcggccattccgcttgacgataagaaaagcttcgacatgctg
caacgttcggaaaccaccgcggtattccagcttgaatcccgcggcatgaaggatctgatc
aaacgtctgcagcctgactgcttcgaagatatgatcgcactggtggccctgttccgcccg
ggcccgctacagtcggggatggtagataactttatcgaccgtaagcatggtcgcgaagag
atttcctatccggacgtacaatggcagcatgagtgtctgaagccggtactggagccaacc
tacggcattatcctgtatcaggaacaggttatgcagattgcccaggagctgtctggttac
acgcttggcggcgcggatatgctgcgtcgtgcgatgggtaagaaaaagccggaagaaatg
gccaagcagcgcggcacctttgaagaaggagcgaaaaagcgcggcgtcgacggcgaactg
gcgatgaaaatctttgacctggtggagaaattcgccggttacggatttaacaaatcacac
tccgccgcctatgcgctggtctcttaccagacgctatggttgaaggcgcattacccagcc
gagtttatggcggcggtaatgacggccgatatggataacaccgagaaagtggtcgggctg
gtggatgaatgctggcgcatggggttaaaaatcctgccgccagacattaactccgggctt
taccatttccacgttaacgatgatggcgagattgtttatggcatcggcgcgataaaaggc
gtgggtgaagggccaattgaagctattattgaggcgcgcaacgaaggcggttacttccgc
gagctgtttgatctctgtgcgcgtacggatatcaaaaaactcaatcgccgggtgctggaa
aaactgattatgtccggggcgtttgaccgccttggcccacaccgcgcggcgttgatgaat
tcgttgaatgatgcgctaaaagccgctgatcagcatgcgaaagccgaggctattggccag
gctgatatgtttggcgtgctggcggaagaacccgaacaaattgaacagtcttatgccaac
tgtacaccgtggcctgagcaggtagtattagacggtgagcgtgaaacgttagggctttac
ctgacggggcaccctatcaaccagtatttaaaagaaattgagcgctatgttggaggccac
aggctgaaagacatgcatccgacagaacgtggtaaagtcaccacggctgcggggctcgtc
attgccgcgcgggtaatggtcaccaagcgcggcaatcgtatcggcatctgtaccctggat
gaccgttccgggcgtctggaagttatgttgtttaccgatgccctggataaataccagcaa
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggcgggcttaaaatgatggcccgtgaagtcatggatattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggacaattccagtacatctctactatcag
agggcggatgcacgtgcgcggttgcgttttggcgcgacgtggcgtgtctctccgagcgat
cgtttgctaaacgatctccgcggccttattggttcggagcaggtggaactggagtttgac
taa
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