Citrobacter sp. CRE-46: AN232_25725
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Entry
AN232_25725 CDS
T05520
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
cie
Citrobacter sp. CRE-46
Brite
KEGG Orthology (KO) [BR:
cie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cie03019
]
AN232_25725
Enzymes [BR:
cie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AN232_25725
Messenger RNA biogenesis [BR:
cie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AN232_25725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
CON_HrpB
Helicase_C
DUF2732
AAA_19
AAA_22
Cas3-like_C_2
HA2_N
Motif
Other DBs
NCBI-ProteinID:
AWS98361
UniProt:
A0A2Z3XD39
LinkDB
All DBs
Position
complement(5136361..5138790)
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AA seq
809 aa
AA seq
DB search
MTSLPVAAVVPALLTALDASPQVLLTAPTGAGKSTWLPLRLLEHGGIKGRIILLEPRRLA
ARNVAQRLAELLNEKPGETVGYRMRAQSCVGPQTRLEVVTEGVLTRMIQRDPELTDVGLV
ILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNGRLQQLLPDAPMIISEGRT
FPVERRYQPLAAHLRFDEAVAIATAELLRHESGSLLLFLPGVGEIQRVQEQLATRVGSDV
VLCPLYGALTLAEQRQAILPAPQGQRKVVLATNIAETSLTIEDIRLVVDCAQERVARYDA
RTGLTRLITQRISQASMTQRAGRAGRLEPGICLHLLAKEQAERAASQGEPEILQSDLSGL
LMELLQWGCTDPAQLNWLDTPPAINLQAAKQLLQMLGALAGDRLSARGQKMAMLGNDPRL
AAMLVSASNDTEAATAAKLTAILEEPPRGGCTDLAVAFSRNHPAWQQRSQQLLKRLNVRS
GQPDSTLLSPLLAQAFADRIARRRGQEGRYQLANGMGAMLDADDASGRHEWLIAPLLLQG
SASPDARILLALPLEIDVLMQTCPELLQQSDTIEWDETQGTLKALRRSRIGQLTVKVQPL
AKPSEEELHQAMLNGIRDKGLSMLNWTPEAEQFRLRLHCAANWLPEYDWPAVDEDSLLAT
LETWLLPHMSGVHSLRALKALNVGQALRGLLDWSMLQRLDSELPAHYTVPTGSRIAIRYH
EDNPPALAVRMQEMFGEARTPTIAQGRVPLVLELLSPAQRPLQVTSDLSAFWQGSYREVQ
KEMKGRYPKHVWPDDPANTAPTRRTKKYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcgttgcccgttgccgccgtagtgcctgcactgcttaccgcccttgatgcctcg
ccgcaggtgctgctgaccgcgccgaccggtgccgggaaatcgacctggctgccgttgcga
ctgcttgagcatggtggcatcaaggggcggattattttgctggagccgcgccgtctggcg
gcacgcaatgtggcgcagcggttggcggagttgctgaacgaaaagcccggcgagaccgtg
gggtatcgcatgcgcgcgcaaagctgcgtggggccgcagacccggctggaagtggtgacg
gaaggcgtcctgacgcgcatgatccaacgcgatcccgaactcacggacgtcggattagtg
atcctcgatgaatttcacgaacggagcttgcaggccgacctggcgctggcgctgttgctg
gatgtacagcagggtctgcgtgacgatctgaaactgttgatcatgtccgcaacgctcgat
aacgggcgcttgcagcagttattgcccgatgcgcccatgattatctctgaaggccgcaca
tttccggttgagcgacggtatcaaccgctggcggcacatctgcgttttgacgaagcggtg
gcgatagccacggcggagctactgcgccatgaaagcggctcgctgctgctgtttttaccg
ggcgttggggaaatccagcgcgtgcaggagcaactggcaacgcgtgtgggcagcgatgtt
gtgctgtgcccactgtatggcgcgctgacgcttgccgagcagcgtcaggcgattttgccc
gcgccgcaaggccagcgcaaagtggtgctggccaccaacattgctgaaaccagcttaacg
attgaagatattcggctggtggtagactgcgctcaggagcgcgtggcgcgctatgacgcg
cgcactggactgacgcgactgattacccagcgcatcagtcaggcctcgatgacgcagcga
gcgggacgcgcagggcgtctggaacccggaatttgtctgcatctgctggccaaagagcag
gcggaaagagcggcttcgcaaggggagccggagatattacagagcgatctgtccgggctg
ctaatggagttgctgcaatggggatgcaccgatcccgcgcaattaaactggctggatacg
ccgcccgctatcaacctgcaggcggcaaaacaactgttgcagatgctgggtgcgcttgcg
ggtgacaggctcagcgctcgcgggcagaaaatggcgatgttggggaacgatcctcgcctg
gcggcgatgctggtcagcgccagcaatgataccgaagcggcaacggcggcaaaactgaca
gcgattctggaggagccgccgcgtggtggctgtaccgatctggctgtggcgttttcacgc
aatcaccccgcctggcagcagcgcagccaacaattgctgaaacggctcaatgttcgcagc
ggacagcccgacagtacgctgctttccccgttgctggcgcaggcgtttgccgaccggatc
gcgcgtcgacgcgggcaggaagggcgttatcaactggctaatggtatgggcgcaatgctg
gatgctgatgacgcttccggacgccatgaatggctgatagcgccgctgttgctacagggc
agcgcttcgccggatgcgcgtattctgctggccctgccgctggagattgacgtgctgatg
cagacgtgtcctgaactgctccagcagtccgacactatcgagtgggatgaaacccagggc
acattaaaagccttacgccgctcgcgcattggtcagctcacggtaaaagtccagccgctg
gctaaaccctcggaagaggagttgcaccaggcgatgttgaatggcattcgcgataaaggg
ctaagtatgctcaactggacgccggaggccgagcagtttcggctgcgtttgcactgtgcg
gcgaattggttgccagaatatgactggcccgcggtagatgaagattctctgctggcgacg
ctggagacctggctgttgccacacatgagcggtgtgcactctttacgcgcgttaaaagca
ttaaatgtgggtcaggcattgcgcggtttgctggactggtcaatgctgcaacgtctggat
agtgaactgccggcgcattacactgtgccgacggggagtcggattgccattcgctatcat
gaagataatcctcctgcgctggcggtgcggatgcaggaaatgtttggcgaagcgaggact
ccaaccatcgctcaaggccgcgttccgctggtgctggagctgctgtctccggcccaacga
ccgctccaggtgaccagcgatctgagcgcgttctggcagggatcgtaccgcgaggtgcaa
aaagagatgaaagggcgttatccgaaacacgtctggccggacgatccggcgaataccgcg
ccaacgcggcgcaccaaaaagtattcgtaa
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