Citrobacter sp. CRE-46: AN232_26185
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Entry
AN232_26185 CDS
T05520
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
cie
Citrobacter sp. CRE-46
Brite
KEGG Orthology (KO) [BR:
cie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cie03021
]
AN232_26185
Transcription machinery [BR:
cie03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AN232_26185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Flavi_DEAD
DUF2482
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AWS98448
UniProt:
A0A2Z3XC57
LinkDB
All DBs
Position
5236905..5239811
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFSSTGENRLYARSDSPVTRVMFNPGDT
ITSHEGWQLHVDEVKEENGLLAYIGTRLDTEETGVTLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DAYNPFETEQLVICSLDFARRSKQRLEHLCDAEWDLLIVDEAHHLVWSEDAPSREYMAIE
QLAERVPGILLLTATPEQLGMESHFARLRLLDPSRFHDFAQFVEEQKNYRPVADAVAMLL
AGNKLSNDELNMLGDMIGEQDIEPLLQAANSDSEDAHSARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFSEEDSGAQVMLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPFLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDTVYNNLIGFLAEPENT
DGFDDLIKTCREQHEALKAQLEQGRDRLLEIHSNGGEKAQQLTESIEEQDDDTSLIAFAM
NLFDIVGINQDDRGDNLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELVYVVEAQAPKQLQLNRFLPPTP
VRMLLDKNGNNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGEAQVEKSAR
ALIDAARKEADEKLTAELSRLEALRAVNPNIRDDELSAIESNRQQVLESLEQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaactgggacttggt
actgttgtcgccatggatgcgcgaaccgtcactttacttttctcatcgacgggcgaaaac
cgtctgtatgcgcgcagtgattctcccgtgacccgcgtgatgttcaatcctggcgatacg
ataacgagccatgaaggctggcaactgcatgtcgatgaagtaaaagaagaaaacggcctg
cttgcctatatcggaacccgccttgataccgaagaaaccggtgtaacgctgcgtgaagtg
ctgctcgacagtaaactggtattcagcaaaccgcaggatcgcctgtttgccggtcagatt
gaccgtatggaccgctttgcgctgcgctatcgcgcgcgtaaatttcagagcgaacagtac
cgtatgccatggagtggtttgcgcggccaacgtaccagcctgatcccccaccagctcaac
attgctcatgatgttggtcgtcgtcacgccccgcgcgttttgctggctgacgaagtgggt
ttaggtaaaaccattgaggccgggatgatcctgcatcagcaactgctttccggcgccgct
gaacgcgtactgatcatcgtcccggagacgctacagcaccagtggctggtcgaaatgctg
cgccgtttcaacctgcgttttgcgctgttcgatgatgagcgttatgcagaagcgcaacac
gacgcctacaacccatttgaaaccgaacagttagttatctgttcgctggactttgcccgt
cgcagtaaacagcgtctggagcacctgtgtgacgccgaatgggatctgctgattgtcgac
gaagcccatcacctggtgtggagcgaagatgcgcccagccgcgaatatatggccattgaa
cagctggctgagcgcgtaccgggtatcctgctgctgaccgctacgccagaacaactgggt
atggaaagccactttgcacgtctgcgcctgctggatccaagccgtttccacgatttcgcc
cagtttgttgaagagcaaaaaaattaccgtccggtcgctgatgccgtcgccatgctactg
gctggcaataagctgagtaacgatgagctgaacatgttaggcgacatgattggcgagcag
gatattgagccattattgcaagcagcaaacagcgacagcgaagacgcccatagcgcgcgt
caggaactggtttcgatgctgatggaccgccatggcaccagccgtgtgctgttccgtaac
acccgtaacggtgtgaaaggcttcccgaaacgcgaactgcataccatcaaattaccgttg
ccgacccaataccagaccgcgataaaagtctccggcattatgggcgcgcgtaagagtgcg
gaagaccgggctcgcgacatgctctacccggaacagatttatcaggaattcgaaggcgac
accggcacctggtggaactttgatccgcgcgtggaatggctgatgggctacctgaccagc
caccgttcgcaaaaagtgctggttatctgcgcgaaagcgaccaccgcgctgcaactggag
caggtcctgcgcgaacgcgaagggatccgcgccgccgtgttccatgaaggaatgtcgatt
attgaacgtgaccgcgcggcggcctggtttagcgaagaagatagcggcgcccaggtgatg
ctgtgttctgaaatcggctcagaagggcgtaacttccagttcgccagcaacctggtgatg
ttcgacctaccgttcaacccggacctgctggaacagcgtattggtcgtctggaccgtatc
ggccaggctcatgatattcagatccacgtaccgttcctggaaaaaaccgcgcaatccgta
ctggtgcgctggtaccacgaaggtctggatgcgttcgaacacacttgcccaaccggacgt
acaatctatgacacggtatacaacaatctgattggcttcctggctgagccggaaaatacc
gatggctttgatgacttgatcaaaacctgccgtgagcagcacgaggcgctgaaagcccaa
ctggagcaaggccgcgatcgcctgctggaaattcactccaatggcggtgaaaaagctcag
caacttaccgaaagtattgaagagcaggatgacgacaccagcctgatcgcctttgccatg
aacctgtttgatatcgtcggtattaatcaggatgaccgcggcgacaatttaatcgtgctg
acgccgtccgatcatatgctggtacctgatttccctggcctgccggaagatggctgcacc
attacgtttgaacgtgatgtcgccctgtcgcgtgaagacgcgcagtttattacctgggag
catccgctgatccgcaatggtctggatctgatcctgtccggcgacaccggaagcagtact
atttctttattgaaaaacaaagcgttaccggtcggtactctgctggttgaactggtctac
gttgtagaggcgcaagcgccgaaacagctgcagttgaaccgcttcctgccgccaacgccg
gtacgcatgctgctggataaaaacggcaataaccttgccgcgcaggttgaattcgaaacc
tttaaccgtcagctcagcgccgttaaccgccacaccggcagcaaactggtcaacgccgtg
cagcaggatgttcatgccatcctgcagttgggtgaggcgcaggtggaaaaatccgcccgt
gcgctgatcgacgcggcgcgcaaagaagcggatgagaagctgacagcagaactgtcgcgt
ctggaagccctacgtgccgttaacccgaacatccgtgatgacgaactgagcgccattgaa
agcaaccgccagcaggtgttggaaagcctggagcaggcgggctggcgtctggatgccctg
cgtctgatcgtcgtgacgcaccagtaa
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