Citrobacter sp. FDAARGOS_156: AL515_00205
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Entry
AL515_00205 CDS
T04313
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
cif
Citrobacter sp. FDAARGOS_156
Brite
KEGG Orthology (KO) [BR:
cif00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
AL515_00205
Enzymes [BR:
cif01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
AL515_00205
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
CHASE8
HAMP
UL41A
Motif
Other DBs
NCBI-ProteinID:
AMH12377
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Position
complement(51587..53593)
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AA seq
668 aa
AA seq
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MRVSRSLTIKQMAMVAAVVMVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSAA
ILKGDIPEAEMILSRIQPAGVVSRADVVLPNQFQALRMSFIPERPVPVTVTRLFELPVQI
SLPVYSLERSANPQPLAYLVLQADSYRMYKFVTSTLSTLVTIYLLLSLILSVAISWCINR
LIVHPLRKIARELNDIPQQELIGYQLALPPMHQDDEIGMLVRSYNLNQQLVLRHSEEQND
NSMRFPVSELPNKTFLMGLLEQIVTGPQTTALMIVTCETLRDTAGVLTETQREILLLTLV
EKLRSVLAPRMVLTQVSGYDFAIIAHGVKEPWHAITLGQQVLTIMNERLPIQGIQLRPSC
NIGVAMYYGDLTAEQLYSRALSAVLTSRRKGKNQIQFFDPQQMEEAQQRLTEENDILTAL
DHQQFALWMQPQVEIASGKMLSAEALLRMQQADGSWELPEGLIDRIESCGLMVTVGYWVL
EESCRQLAAWQERGLMLPLSVNLSALQLMHPSMVSDLLELLNRYRIKPGTLILEVTESRH
IDDPNAAVAILRPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPVDVLKIDKMFVEGLPED
SSMISAIIQLAHSLNLQMIAEGVETEAQRDWLSQAGVDVAQGFLFARPVPADIFEERYLA
KESADYKS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtgtcagtcgctcgttaacaattaagcagatggcgatggttgcggccgttgtcatg
gtgtttgtttttattttttgcaccgttttgttgttccatttggtccagcagaaccgctat
aacacggctacgcaactggaaagcatcgctcgctccgtccgtgaacctctgtcggctgcc
atcctgaagggggatatccccgaagcagaaatgattttaagccgtatccagcccgctggc
gtggtcagtcgcgcggatgtggtactgcccaaccagtttcaggcattgcggatgagcttt
atccctgaacgccccgttccggttacggtgacccgactgtttgaactgccggtgcagatt
tcgctcccggtctattctcttgagcgctctgccaacccacagccgctggcgtatctggtg
ttacaggcggattcataccgcatgtacaaattcgtgacgagcacgctttcaacgttagtg
accatttacttacttttgtcgttaatcctgtcggtagccatctcctggtgtattaaccgc
ctgattgtgcacccgttacgcaaaattgctcgcgaactgaacgatattccgcagcaggag
ctgatcggctatcaactggcattaccgcctatgcatcaggatgatgagattgggatgctg
gtgcgtagctacaacctgaatcagcaactggtcctgcgccacagtgaagagcagaacgac
aattcgatgcgctttccggtctctgaactgccaaataagacgttcttaatggggctactt
gagcagattgttactggcccgcaaacaactgcgttgatgattgtcacctgcgaaaccctg
cgtgataccgccggtgtattgaccgagacccagcgggaaatcctgctgttgacgctggtt
gagaaactgagatcggtgctggcgcccagaatggtgcttactcaggtgagcggctatgac
ttcgcgattatcgcgcacggtgtgaaggaaccctggcatgcaatcacattaggtcagcaa
gtacttactatcatgaatgaacggttgcccattcagggtattcagcttcgcccgagctgc
aacattggggtggcgatgtactacggcgatttgacggcggaacagctatacagtcgcgcg
ctatcggcagtgctaacctcgcgtcgtaagggtaaaaatcagatccaattctttgatccg
cagcaaatggaagaagcacagcaacgtttgaccgaagagaacgacattctgaccgcgctt
gatcaccagcaatttgcgctgtggatgcagccgcaggtagagatcgccagcggcaagatg
ttgagtgctgaagctttattgcggatgcagcaggcagacggaagctgggaattaccggaa
gggttaatcgacaggattgaatcctgcggtctgatggtgacggttggatattgggtgctg
gaggagtcttgtcgccagcttgcggcctggcaggaacgtggtctgatgttaccgctgtcg
gtgaatctgtctgcgctacagctcatgcaccccagtatggtgtcggatctgctggagttg
ttaaaccgatatcgcattaagcccggcaccttgattctggaagttaccgaaagccggcat
atagatgatccaaacgccgctgtcgctatcctgcgcccgctgcgcaatgcgggggtacgc
attgcgttggatgactttggtatgggctatgcgggtctgcgacagttgcagcatatgaag
tcactgccagttgatgtgctcaaaatcgataagatgtttgttgaaggtctgccagaagat
agcagtatgatttctgccattattcagctggctcacagtctcaatttgcaaatgattgcg
gaaggcgttgaaaccgaagcgcaacgcgactggttatcacaggcaggggtggatgtcgcg
caaggattcctgtttgcccgtccggttccggcagatatcttcgaagaacgctatttagcg
aaggaatcagctgattacaaaagttaa
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