Citrobacter sp. FDAARGOS_156: AL515_01585
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Entry
AL515_01585 CDS
T04313
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cif
Citrobacter sp. FDAARGOS_156
Pathway
cif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL515_01585 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cif03021
]
AL515_01585 (rho)
03019 Messenger RNA biogenesis [BR:
cif03019
]
AL515_01585 (rho)
Transcription machinery [BR:
cif03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AL515_01585 (rho)
Messenger RNA biogenesis [BR:
cif03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AL515_01585 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AMH12628
LinkDB
All DBs
Position
342803..344062
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaaat
atgggccttgaaaacctggctcgtatgcgcaagcaggacattatttttgccatcctgaag
cagcacgcaaagagtggcgaagatatctttggtgacggtgtgctggagatattgcaggat
ggatttggtttcctccgctctgcagacagctcctacctcgccggtcctgatgacatctac
gtttctccaagccaaatccgccgtttcaacctccgcactggtgataccatttctggtaag
attcgcccgccaaaagaaggtgaacgctattttgcgctgttgaaagttaacgaagttaac
tacgacaaaccggaaaacgcccgtaacaagatcctcttcgaaaacttaacgccgctgcac
gcaaactcccgtctgcgtatggagcgtggtaatggttctaccgaggacttaacggcgcgc
gtactggatctggcatcgccgatcggtcgtggccaacgtggtctgattgtggcaccgcca
aaagcgggtaaaaccatgctgctgcagaacattgcgcagagcattgcctacaaccacccg
gactgtgtgctgatggtgctgctgattgacgaacgtccggaagaagtgaccgagatgcag
cgtctggttaaaggtgaagttgtggcttctacctttgatgaacccgcatctcgccacgtt
caggttgcggaaatggtaatcgagaaggcgaaacgtctggttgaacataagaaagacgtt
atcatcctgctcgactccatcacgcgtctggcgcgtgcgtacaacactgtggtcccggct
tccggtaaagtcctgaccggtggtgtcgatgctaacgccctgcaccgtccgaagcgtttc
ttcggtgcggcacgtaacgtggaagagggcggcagcctgaccatcatcgcgactgcgctt
atcgataccggctctaaaatggatgaagttatctatgaagagtttaaaggtaccggcaac
atggaactgcatctctcgcgtaagatcgctgaaaaacgcgtcttcccggctatcgactac
aatcgttccggtacccgtaaagaagagctgcttaccacccaggaagagctgcagaaaatg
tggatcctgcgcaaaatcatccatccgatgggtgaaattgatgcaatggagttcctcatt
aacaagctggcgatgacgaagaccaatgatgacttcttcgatatgatgaagcgctcataa
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