Citrobacter sp. FDAARGOS_156: AL515_05095
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Entry
AL515_05095 CDS
T04313
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
cif
Citrobacter sp. FDAARGOS_156
Brite
KEGG Orthology (KO) [BR:
cif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cif03021
]
AL515_05095
Transcription machinery [BR:
cif03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AL515_05095
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Flavi_DEAD
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AMH13260
LinkDB
All DBs
Position
complement(1090085..1092991)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFSSTGENRLYARSDSPVTRVMFNPGDT
ITSHEGWQLHVDEVKEENGLLAYIGTRLDTEETGVTLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DAYNPFETEQLVICSLDFARRSKQRLEHLCDAEWDLLIVDEAHHLVWSEDAPSREYMAVE
QLAERVPGILLLTATPEQLGLESHFARLRLLDPSRFHDFAQFVEEQKNYRPVADAVAMLL
AGNKLSNNELNMLGDMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFSEEDSGAQVMLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDTVYNNLIGYLAEPENT
DGFDDLIKTCREQHDALKAQLEQGRDRLLEIHSNGGEKALALAESIEEQDDDTSLIAFAM
NLFDIVGINQDDRGDNLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELVYVVEAQAPKQLQLNRFLPPTP
VRMLLDKNGNNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGEAQVEKSAR
ALIDAARKEADEKLTAELSRLEALRAVNPNIRDDELSAIESNRQQVMESLDQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaattgggacttggt
accgttgtcgccatggatgcgcgaaccgtcactttacttttctcttcgacgggtgaaaac
cgtctgtatgcgcgcagtgattcccccgtgacccgcgtgatgttcaatcctggtgatacg
ataacgagccatgaaggctggcaactgcatgtcgatgaagtaaaagaagaaaacggcctg
cttgcctatatcggaacccgccttgataccgaagaaaccggtgtaacgctgcgtgaagtg
ctgctggacagcaagctggtattcagcaaaccacaggatcgcctgtttgccggccagatt
gaccgtatggaccgctttgcgctgcgctatcgcgcacgtaaatttcagagcgagcagtac
cgtatgccgtggagtggtttgcgtggtcaacgtaccagcctgatcccccaccagctcaac
attgcccatgacgtcggccgtcgtcatgcccctcgcgtattgctggcagacgaagtgggt
ttaggtaaaaccattgaagccgggatgatcctgcatcaacagctgctgtcaggcgccgca
gagcgcgtactgatcatcgtcccggagacgttacagcaccagtggctggtcgaaatgctg
cgtcgcttcaacctgcgttttgcgctgtttgatgatgagcgttatgcagaagcgcagcac
gatgcctacaacccgtttgaaaccgaacagttggttatctgttcgctggactttgcccgt
cgcagtaaacagcgcctggagcatctgtgtgacgccgaatgggatctgctgattgtcgat
gaagcgcatcacctggtgtggagcgaagacgcgcccagccgtgaatatatggccgttgaa
caactggcagaacgcgtaccgggcatcctgctgctgaccgcaacgccggaacaactgggc
ctggaaagccactttgcgcgcctgcgcctgctggacccaagccgcttccacgatttcgcc
cagtttgttgaagaacagaaaaattaccgtccggtcgccgatgccgtcgccatgctgctg
gctggcaacaaactgagcaacaatgagctgaacatgttaggcgacatgattggcgagcag
gacattgagccgctattgcaggcggcaaacagcgacagcgaagatgcccagagcgcgcgt
caggagctggtttcgatgctgatggaccgccatggcaccagccgcgtgctgttccgtaac
acccgtaatggtgtgaaaggcttcccaaaacgcgagctgcacaccatcaagctgccgctg
ccgacccaataccagacggcgattaaagtttccggcattatgggcgcgcgtaagagtgcg
gaagaccgggcgcgcgacatgctctacccggaacagatttatcaggaattcgaaggcgat
accggtacctggtggaactttgatccgcgcgtggaatggctgatgggctatctgaccagc
caccgctcgcaaaaagtactggttatctgtgcaaaagccaccaccgcgcttcaactggag
caggttctgcgcgagcgcgaaggtatccgcgctgccgtgttccatgaagggatgtcgatc
attgagcgtgaccgcgccgcagcctggtttagcgaagaagatagcggcgctcaggtaatg
ctgtgttctgaaatcggctccgaagggcgtaacttccagttcgccagcaatctggtgatg
tttgacctgccgttcaacccggacctgctggaacagcgtattggccgtctggaccgtatt
ggtcaggcgcatgatattcagattcacgtcccgtacctggaaaaaaccgcgcaatccgta
ctggtgcgctggtaccacgaaggtctggatgcgttcgaacacacctgcccgaccggccgt
accatctacgacacggtctataacaatctgatcggctacctggctgaaccagaaaatacc
gatggctttgacgatctgatcaaaacctgccgcgaacagcatgacgcgctgaaagcacag
ctggagcaaggtcgcgatcgtctgctggagatccactctaacggcggtgaaaaagcgctg
gcactggctgagagcattgaagagcaggacgacgataccagcctgatcgccttcgccatg
aacctgtttgatatcgttggtattaatcaggatgaccgtggcgacaatctgatcgtgctg
accccgtccgatcatatgctggtgcctgatttccctgggctgccggaagatggctgcacc
attacgtttgaacgtgatgtcgccttgtcgcgtgaagatgcgcagtttattacctgggag
catccgttaatccgtaatggtctggatcttatcctctccggcgacaccggtagcagcacc
atttcgttgttgaaaaacaaagcattaccggtcggcactctgctggttgagctggtgtat
gtggttgaagcgcaagcgccgaaacagctgcagttgaaccgcttcctgccgccaacgccg
gtacgtatgctgctggataaaaacggcaataaccttgccgcacaggttgaattcgaaacc
tttaaccgccagctcagcgctgttaaccgccacaccggcagtaaactggtcaacgccgtg
cagcaggacgttcatgccattctgcaactgggtgaagcgcaggtggaaaaatcggctcgc
gcgctgatcgacgcggcgcgtaaagaagcggacgaaaaactgactgcggaactgtcgcgc
ctcgaagcgctgcgtgccgttaacccgaacatccgtgatgacgaactcagcgcaattgaa
agcaaccgtcagcaggtgatggaaagcctggatcaggcgggatggcgtcttgatgccctg
cgcctgatcgtcgtgacgcatcagtaa
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