Citrobacter sp. FDAARGOS_156: AL515_05490
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Entry
AL515_05490 CDS
T04313
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
cif
Citrobacter sp. FDAARGOS_156
Brite
KEGG Orthology (KO) [BR:
cif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cif03016
]
AL515_05490
Enzymes [BR:
cif01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AL515_05490
Transfer RNA biogenesis [BR:
cif03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AL515_05490
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AMH13337
LinkDB
All DBs
Position
complement(1184355..1184885)
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AA seq
176 aa
AA seq
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MSEPKRLFFAIELPAEVREQLIHWRAAQFPPEAGRPVAADNLHLTLAFLGNVSAEKQQAL
SQLAGRIRQPAFTLRLDDAGQWLRSRVVWLGMRQPPRGLLQLANMLRAQAARSGCYQSPQ
PFHPHITLLRDASHAVAIPPPGFCWSFPVTEFALYASSFERGRTRYSTLQRWVLSK
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagccgaaacggctgttctttgccattgaattgcctgctgaggttcgggagcag
ctcatccactggcgagccgcacaatttccgccagaggcgggccgtccggtcgccgcagac
aatctgcacctgacgctggcttttttagggaatgtgagtgccgagaaacagcaggcgcta
tcacaactggctggacgcattcgccagccggcgttcacgctcaggctggacgatgcaggg
caatggctgcgttcgcgggttgtgtggctgggaatgcgtcagccgccacgcgggttattg
caactggccaatatgctgcgagcacaggccgcacgcagcggatgctaccagagcccacag
ccctttcacccgcatatcacgctcttgcgcgatgccagtcatgcagtcgccatcccgccc
cccggtttttgctggtcatttccggttacggagtttgcgctttatgcctcgtcatttgag
cgaggacgcactcgctattcaaccttgcaacgctgggtgctgagcaaataa
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