Citrobacter sp. FDAARGOS_156: AL515_13070
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Entry
AL515_13070 CDS
T04313
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cif
Citrobacter sp. FDAARGOS_156
Brite
KEGG Orthology (KO) [BR:
cif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cif03016
]
AL515_13070
Enzymes [BR:
cif01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AL515_13070
Transfer RNA biogenesis [BR:
cif03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AL515_13070
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
OSR1_C
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
AMH14733
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Position
2807815..2809749
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AA seq
644 aa
AA seq
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MLQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHTEKDRESAEPEELIEPFLTRFVGKVQGKNDRLSIVPDHPLLKDAIPCRAARGVEH
EFKEGDWAVAEMRRHPLKGDRTFYAELTQFITFADDHFVPWWVTLARHNLEKEAPDGIAT
EMLDEGLVREDLTALNFVTIDSASTQDMDDALYAEEQTDGKLQLTVAIADPTAWIAEGSK
LDNIAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEIRPVLACRMSITADGTIEDNITF
FAATIESKAKLAYDNVSDWLEGSGDWQPENDAIAQQIHLLHRICLSRGEWRHNHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGIYNVHMGFD
PANAEALAALLKTHGMHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSYAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETISRPQDDTTLQMAERRRLNRM
AERDVGDWLYARFLNDKAGTDTRFAAEIIDVSRGGMRVRLIDNGAVAFIPAPFLHAVRDE
LVCSQESGTVQIKGEVVYKVTDVIDVTIAEVRMETRSVIARPAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggacaacccgctgctagcgcagcttaaacagcaactacattcccagacgcca
cgtgctgaaggggtggtaaaagccacggaaaaaggctttggcttcctggaagtcgatgca
caaaaaagctatttcattccaccgccgcagatgaaaaaagtgatgcatggcgaccgcatt
gtggcggttatccatacggaaaaagatcgcgaatctgccgaaccggaagaactgatcgag
ccgttcctgacgcgcttcgtgggcaaagttcagggtaagaatgaccgcctgtccattgtg
ccggatcatccgctcctgaaagatgcgattccctgccgcgccgcgcgtggcgttgaacat
gaatttaaagaaggtgactgggctgttgcagaaatgcgtcgccacccgttaaaaggcgac
cgcaccttctacgccgagttaacccaatttattaccttcgctgacgatcacttcgttccg
tggtgggtcacactggctcgccataatctggaaaaagaagcacccgatggcatcgccact
gagatgctggatgagggtctggtgcgcgaggacttaaccgcactgaacttcgtcaccatc
gacagcgccagtacgcaggacatggatgacgcgctttacgccgaagaacaaacggacggt
aaattgcagttaaccgtcgcgattgccgatcctaccgcctggattgctgaaggcagtaag
ctggataacattgcaaaaattcgtgcatttaccaactacctgccggggttcaacatccca
atgttgccgcgcgagctttcggacgatctgtgttctctgcgtgctaacgaaattcgcccg
gttctggcctgccgcatgagcatcactgctgacggcacgatcgaagacaatatcaccttc
ttcgcagcaacgattgaatcgaaagcgaagctggcctacgacaacgtctctgactggctt
gaaggctcgggtgactggcagccggagaatgacgcaattgcacagcagatccatctgctg
caccgtatctgtctcagtcgtggcgaatggcgccataatcacgctctggtattcaaagac
cgcccggattaccgttttgttctcggtgaaaaaggcgaagtactggatatcgtggcggaa
ccgcgccgcatcgcgaaccgcattgtggaagagtccatgattgcggcgaacatttgtgct
gcccgcgtactgcgcgacaagctgggctttggtatttataacgtgcatatgggattcgat
ccggctaacgcagaagcactggctgccctactgaaaacccatggtatgcacgttgatgct
gaagaggtcctgacgctggaaggcttctgtaaactgcgtcgtgaactggatgcgcagcct
tccggtttcctcgacagccgcatccgccgattccagtcttacgctgagattagcaccgag
ccgggtccgcattttggtctgggcctggaagcttatgccacctggacctcgcctatccgt
aaatatggcgacatgatcaaccatcgcttgcttaaggccatcatcaaaggtgagacaatt
tcccgcccgcaggatgatacgactttgcagatggctgaacgtcgccgcctgaaccgcatg
gccgagcgtgatgtgggtgactggctgtatgcacgttttctgaatgacaaagccggcacc
gacacccgctttgcggccgagattattgatgtcagccgtggtggtatgcgtgtacgttta
attgataacggcgcggtagcctttattccggcccccttcctgcacgcggttcgtgatgaa
ctggtgtgtagccaggaaagtggtacggtccagatcaaaggtgaggtggtttacaaagtt
actgatgtcattgacgtcaccatcgccgaagtgcggatggaaacccgcagcgtcatcgcg
cgccctgccgtataa
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