Citrobacter sp. FDAARGOS_156: AL515_15425
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Entry
AL515_15425 CDS
T04313
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
cif
Citrobacter sp. FDAARGOS_156
Brite
KEGG Orthology (KO) [BR:
cif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cif03400
]
AL515_15425
DNA repair and recombination proteins [BR:
cif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
AL515_15425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
AAA_16
zf-tcix
SLFN-g3_helicase
AAA_22
DUF7577
AAA
Zn_ribbon_3
TerL_ATPase
Motif
Other DBs
NCBI-ProteinID:
AMH15170
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Position
3290913..3292673
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AA seq
586 aa
AA seq
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MIFTLRPYQKEAVDATLNHFRHHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKE
LVAQNHAKYCALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDAFQGEFSLLIVDECH
RIGDDEESQYQQILTHLTNVNPHLRLLGLTATPFRLGKGWIYHFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNQELKKQQRITPH
IISQIVEFAQTRKGVMIFAATVEHAKEIVGLLPADDAALITGDTPGAERDVLIEEFKAQR
FRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYAPEVGAPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG
HREQCDFRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALRLKDALVLRCSGMA
LQNGQDEKGEWLKITYYDEDGADVSERFRLHTPAQRTAFEQLFIRPHTRTPGIPLRWITA
ADILAQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgatttttactcttcgtccttaccaaaaagaagccgtggatgccacgctcaaccatttt
cgccatcaccgtactccggcagttatcgtcctccccacaggcgcgggcaaaagcctggtg
attgccgagctggcccgcgtggcgcggggtcgcgtactggtactggcgcacgtcaaagag
ctggtcgcgcaaaaccacgcgaaatattgcgcgctggggctggaagccgatatttttgcc
gcaggtctgaagcgtaaagagagtcacgggaaagtggtatttggcagcgtacagtcggtg
gcgcgcaatctggacgcctttcagggagaattctccctgctcatcgtcgatgaatgccat
cgcattggtgatgatgaagagagccagtatcaacaaatcctgacacacctgaccaacgta
aaccctcacttacgcctgctcggacttaccgccacgccttttcgcttgggcaaaggctgg
atttatcattttcattatcacggaatggtgcgcggcgatgaaaaagcactgtttcgcgac
tgcatttatgaattaccgctgcgctacatgattaaacacggctacctgacgccgccagaa
cgcctcgacatgccggtcgtacaatatgatttcagccgcctgcaggcgcaaagtaacggc
ctgtttagcgaagcggacctgaatcaggaactgaaaaagcagcagcgaataacgccgcat
atcatcagccagattgtcgagtttgctcagacacgcaaaggggtaatgattttcgccgct
accgttgagcacgccaaagagatagtcggcctgctgcctgctgatgatgcggcgcttatc
accggggacacgcctggcgctgaacgcgacgtgttgattgaagagttcaaagcccaacgt
tttcgctatctggtgaatgtgtcggtcctgaccactggcttcgatgccccgcacgtcgac
cttatcgccattctgcgcccgaccgagtcagttagcctttaccaacaaatcgttggacga
gggttgcgcctggcgccggggaaaacggactgtctgatccttgattacgccgggaatccg
cacgacctgtacgccccggaagtgggtgcgcccaaagggaaaagtgacaacgttccggta
caggtgttctgtcctgcctgcggctttgccaacaccttctggggaaaaacaacggccgac
ggcacgctgattgagcactttggccgccgctgtcagggatggtttgaagatgatgacggc
catcgcgaacagtgcgattttcgtttccgttttaaaaactgcccgcagtgcaacgcggaa
aatgacatcgccgcccgccgttgtcgggagtgcgacacggtactggttgacccggatgac
atgctgaaagccgcgctcaggcttaaagatgcgctggttttgcgctgcagcgggatggcg
ctacaaaatgggcaggatgaaaaaggcgaatggctgaaaattacctattacgatgaagat
ggcgccgacgtcagcgaacgctttcgcctgcatactcccgcgcagcgtacagccttcgag
caactgtttattcgcccgcacacccgaacgcccggcattcccttacgctggataaccgcc
gccgatatcctcgcccagcaggcgctgttacgtcatcctgatttcgtggtggcgcgcatg
aaaggtcagtactggcaggtccgtgaaaaggtcttcgattatgaaggacgctttcgtcgg
gcacatgaattacgcggttaa
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