Citrobacter sp. FDAARGOS_156: AL515_17370
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Entry
AL515_17370 CDS
T04313
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
cif
Citrobacter sp. FDAARGOS_156
Brite
KEGG Orthology (KO) [BR:
cif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cif03009
]
AL515_17370
Enzymes [BR:
cif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AL515_17370
Ribosome biogenesis [BR:
cif03009
]
Prokaryotic type
rRNA helicases
AL515_17370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_22
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AMH15525
UniProt:
A0A9Q2KSG3
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All DBs
Position
3702975..3704303
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AA seq
442 aa
AA seq
DB search
MTVTTFSELELDESLLEALQEKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVAEHARELAKNTHLDIATITGGVAYMNHM
EVFSENQDIVVATTGRLLQYIKEENFDCHAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEDPVEVSADPSTRERKKIHQFYYRADDIEHKTALLI
HLLKQPEATRSIVFVRKRERVHELAGWLRQAGINNCYLEGEMVQNKRNEAIKRLTDGRVN
VLVATDVAARGIDIPDVSHVFNFDMPRSGDAYLHRIGRTGRAGRKGTAISLVEAHDHLLL
GKASRYIDEPLKARVIDELRPTTRAPSEKSNGKPSKKVLAKRAEKKAKEKEKPRVKKRHR
DAKNIGKRRKPSGAATQQSDKE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagcctgctggaagccctccag
gaaaaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgat
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcatatttgctg
ccagcgttgcagcacttgctcgacttcccgcgcaagaaatcaggtccaccgcgcatttta
atcctgacaccgacgcgcgaactggcgatgcaggttgccgaacacgcccgtgaattggcc
aaaaatacgcatctggatattgccaccattaccggcggcgtggcttacatgaaccacatg
gaagtctttagcgaaaaccaggacatcgtggtcgccaccactggtcgtctgctgcaatac
attaaagaagagaacttcgactgccatgcagttgaaacgctgatcctcgatgaagcagac
cgtatgctggacatgggctttgcccaggacatcgaacatatcgccggtgaaacccgctgg
cgtaagcaaacgatgctgttctccgccaccctggaaggcgatgcgatcaaagattttgcc
gagcgtctgctggaagatcctgtcgaagtctcggcagatccgtccacccgcgaacgcaag
aagatccatcagttttactaccgtgccgatgatatcgagcacaaaactgccctgctgatc
catctgttaaaacagccggaagcgacccgctcaattgtctttgtacgcaaacgcgaacgt
gtgcacgagctggctggctggctgcgccaggcaggcattaataactgctatctcgaaggc
gagatggtgcagaacaaacgtaacgaagcgatcaaacgcctgaccgatggtcgcgtgaac
gtgctggtagccaccgacgttgccgctcgcgggatcgatattcctgacgtcagccacgtg
tttaacttcgacatgccgcgcagtggcgatgcctatctgcaccgcattggtcgtaccggt
cgtgccgggcgtaaaggtactgcaatctctttggttgaagcgcatgaccacctgctgctc
ggcaaagcgagccgctatattgacgagccgctgaaagcacgcgtcatcgacgaactgcgt
ccaaccacgcgcgcgccaagtgagaaatccaacggtaagccatccaagaaagtgctggcg
aagcgcgccgagaaaaaagcgaaagagaaagagaagccgcgggtgaaaaaacgtcaccgc
gacgccaaaaatatcggcaaacgtcgtaagccgagcggagctgctacccagcagtccgac
aaagagtaa
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