Citrobacter sp. FDAARGOS_156: AL515_18165
Help
Entry
AL515_18165 CDS
T04313
Symbol
srlR
Name
(GenBank) HTH domain-containing protein
KO
K02468
DeoR family transcriptional regulator, glucitol operon repressor
Organism
cif
Citrobacter sp. FDAARGOS_156
Brite
KEGG Orthology (KO) [BR:
cif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cif03000
]
AL515_18165 (srlR)
Transcription factors [BR:
cif03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
AL515_18165 (srlR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
HVO_A0114
Put_DNA-bind_N
HTH_5
HTH_Mga
FeoC
HTH_AsnC-type
GntR
FokI_D3
MarR_2
Rrf2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AMH15666
LinkDB
All DBs
Position
3878886..3879659
Genome browser
AA seq
257 aa
AA seq
DB search
MKPRQRQAAILEHLQKQGKCSVEELAHYFDTTGTTIRKDLVILENAGTVIRTYGGVVLNK
DESDPPIDHKTLINTHKKERIAEAAVRFIHDGDSIILDAGSTVLQMVPMLTRFSNITVMT
NSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENAFEQFSFDKLFMGTDGIDLNA
GVTTFNEVFSVSKAMCNAAREVILMADSSKFGRKSPNVVCSLESVDKLITDAGIDPAFRQ
ALEAKGIEVIITGETNE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctcgtcagcgtcaggctgccatactggagcacctgcaaaagcagggaaaatgc
tcggttgaagaactggcccactactttgacaccaccggcacgaccattcgcaaagacctg
gtcattctggaaaatgccggcaccgtcattcgtacctatggcggcgtggtattaaataaa
gacgaatccgacccgccaatcgatcacaaaacgctaatcaacacgcataaaaaagagcgg
attgccgaagccgccgtccgttttattcacgatggcgactcgattattctggatgcgggc
agcaccgtactgcagatggtgccgatgctcacgcgctttagcaacatcaccgttatgacc
aacagcctgcacattgttaacgccctttcggagctggacaacgagcaaaccatcctgatg
cccggcgggacctttcgcaaaaaatctgcgtcatttcacggtcagctggcagaaaacgcc
tttgagcagttcagctttgataaactcttcatgggcaccgacggcattgacctcaatgcc
ggcgtgaccacttttaatgaggtgtttagcgtcagtaaagcgatgtgtaatgccgctcgc
gaagtgattctgatggctgactcgtcaaaatttgggcgcaaaagccctaatgttgtatgc
agtctggaaagcgtcgacaagctgattaccgatgcgggtatcgaccctgcatttcgtcag
gcgctggaagcaaaagggattgaagtgatcataaccggagaaaccaatgagtga
DBGET
integrated database retrieval system
