Citrobacter sp. FDAARGOS_156: AL515_18705
Help
Entry
AL515_18705 CDS
T04313
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
cif
Citrobacter sp. FDAARGOS_156
Pathway
cif03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AL515_18705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cif03400
]
AL515_18705
Enzymes [BR:
cif01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AL515_18705
DNA repair and recombination proteins [BR:
cif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AL515_18705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AMH15767
LinkDB
All DBs
Position
complement(3996790..4000335)
Genome browser
AA seq
1181 aa
AA seq
DB search
MNDAAESLDPLRLPLTGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELL
VVTFTEAATEELRGRIRSNIHELRIACLRETTDNPLYVRLLDEIADKKQAAQWLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPRDIA
QVIFETWKGPQALLRDIDRYLQGEAPVIKAPPPDDETLATRHEQILARINQIKQQWCDAV
DELDGLLEASGIDRRKFNRGNQGKWIEKISAWAQEETQSYQLPDALEKFSQRFLEERTKA
GGVTPQHPLFVAIDQLLGQPLTIRDLVITRALAEIRTAVAEEKRRRGELGFDDMLSRLDA
ALRSESGDALATAIRTRFPVAMIDEFQDTDPQQYRIFRRIWQHQPDTALLLIGDPKQAIY
AFRGADIFTYMKARSEVSAHYTLDTNWRSAPGMVNSVNTIFSQMNDAFMFRDIPFSPVKS
AEKNQSLQFVLHGETQPAMSMWLMEGESCGVGDYQNYMAQVCATQIRDWLKAGYSGAAQL
VSGKTSRPVRASDISVLVRSRQEAALVRDALTQLAIPSVYLSNRDSVFETLEAQELLWVL
QAVMTPERENTLRSALATSMMGLNAQDLEALNNDENAWDAVVEEFDGYRQIWHKRGVMPM
LRALMSARHIAENLLATAGGERRLTDILHISELLQEAGSQLESEHALVRWLSQHILEPDS
NASSQQLRLESDKHLVKIVTIHKSKGLEYPLVWLPFITNFRVQDQAFYHDRSSFEAVLDL
SDAAESVELAEAERLAEDLRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGR
LLQKGEPMDAAGLRGAIEALCGEDIACLTPNKPDGERWQVAQPASSTLNAKILQRTPGDS
WRVTSYSGLQQRGHGIAQDLIPRLDIDAAGVGEVIEESGLTPHQFPRGASPGTFLHSLFE
DLDFTQPVEPHWVEEKLALGGYDAHWTPVLTAWLDAILLAPLNETGVSLSQLSAREKQVE
MEFYLPISQPLMASQLDALIRQYDPLSAGCPPLDFMQVRGMLKGFIDLVFRHQGRYYLLD
YKSNWLGEDSSAYTQQAMASAMQAHRYDLQYQLYTLALHRYLRHRIADYDYERHFGGVIY
LFLRGVDRENPQQGIYATRPDGELIALMDELFAGAALEEMQ
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgccgctgagtcccttgatccactccgcttgcccctgacgggcgagcgcctg
attgaagcctctgcgggcaccggtaaaacctttaccatcgccgccctgtatttacgttta
ctgcttggactgggcggctctgccgcctttccccgtccgctgaccgtcgaagaactgtta
gtggtcaccttcaccgaggcggctactgaagagctgcgcggtcgaattcgtagcaacatc
catgaactgcgtattgcctgcctgcgtgaaaccaccgataacccgctatacgtccgtctg
ttagatgaaatcgccgataaaaaacaggccgcccagtggctgctattggcagaaagacag
atggatgaagcggcggtgtttaccattcacggcttttgccagcgtatgctcagcctcaac
gcttttgagtcaggcatgctgtttgagcaacaactaatcgaagatgaatcgctgctgcgc
tatcaggcctgtgcggacttctggcgtcgacactgctatccgctgccccgtgacattgcg
caggtgatttttgaaacgtggaaaggaccgcaggcgctgctgagagatatcgatcgctat
ctgcaaggggaagcaccggttatcaaggctccaccgcccgatgacgaaacgctggcaacc
cggcacgaacaaatcctcgcgcgcattaatcaaattaagcagcaatggtgcgatgccgtt
gatgagctggatggcctgctggaagcatccgggatcgaccggcgtaaatttaatcgtggt
aaccagggtaagtggatcgaaaagatcagcgcatgggcgcaggaagaaacccaaagctat
cagttgcctgatgcgctggagaaattctcccagcgctttttagaagagcgaaccaaagcg
ggcggcgtaacgcctcagcacccgcttttcgtcgctattgatcaactgcttggccaaccg
ctgacaatccgcgatctggtgatcacccgggcgctggcggagatccgcacggcggttgcc
gaggagaaacgccgccgcggcgagctgggttttgacgatatgctcagccgtctggatgca
gcgttgcgcagtgaaagcggcgatgcgctggcgacggcgattcgtacccgttttccggtc
gcgatgattgatgagttccaggataccgacccgcagcaataccgtattttccgccgtatc
tggcagcatcaaccggacaccgcgctgctgctgattggcgatccgaaacaggcaatttac
gcctttcgcggcgcggatatctttacctacatgaaggcgcgcagcgaagtcagcgcgcac
tatacgctcgatactaactggcgttcggctcctggcatggtcaatagcgtgaatacgatt
ttcagccagatgaacgacgcctttatgttccgcgacatccccttcagcccggtaaaatcc
gcagagaaaaaccagtcgcttcagtttgttttacacggtgaaacgcagccagccatgagt
atgtggctgatggaaggggaaagctgtggcgtaggcgactatcagaactacatggcgcag
gtgtgcgccacgcaaattcgcgactggcttaaggccgggtattctggcgctgcacaactg
gtcagcggtaaaacgtccaggccggtacgcgcctcggacatcagcgtactggttcgtagc
cgccaggaggcggcgctggtccgcgatgcgctgacgcaactggccattccctctgtttat
ctctccaaccgtgacagcgtgtttgaaacgctggaagcgcaggaactgctgtgggtgctg
caagcggtgatgacgccggagcgtgagaacacgctgcgtagcgcgctggcaacctcaatg
atggggctgaatgcgcaggatctcgaagcgttaaataacgacgaaaatgcctgggatgcg
gtagtcgaggagttcgatggctatcgtcagatctggcataaacgcggcgtgatgcccatg
ctgcgcgcgctgatgtccgctcgccatattgcggaaaacctgctggcgacggcggggggc
gaacgccgcctgaccgatattttacatatcagcgaactgctccaggaagccggatcgcaa
ctggaaagcgagcatgcgctggtgcgctggctatctcagcatattcttgaacccgacagc
aatgcgtccagtcagcagctcaggctcgaaagcgacaagcatttggttaaaatcgtcacc
atccataaatcgaaagggctggaatatccgctggtctggttgccgtttatcaccaatttc
cgcgtccaggatcaggctttctaccacgatcgcagctcctttgaagcggtgctggatctc
agcgatgccgcggagagcgttgagctggccgaagcggaacgtctggcagaagacttgcgc
ttgctctatgttgcgctcacccgttcggtatggcactgcagccttggcgtggcgccgttg
gtacgccgtcggggcgataagaaaggggataccgatgtgcatcagagtgcccttggccgc
ctgctgcaaaaaggcgagccgatggatgccgcgggtctgcgtggcgctattgaggcgctg
tgcggtgaggatatcgcctgcctgacgccgaataaaccggacggtgagcgctggcaggtt
gcacagcccgccagttctacgttgaatgcaaaaatactgcagcgtacacctggtgacagc
tggcgcgtgaccagctattccggtctgcaacagcgtgggcatggtattgcgcaggatctg
atcccgcgactggatatcgatgccgcaggcgtcggtgaggttattgaagagtcaggactc
acgccgcatcagtttccgcgcggcgcttcgccgggtacatttttgcatagcctgtttgaa
gatctcgacttcacccaaccggtagagccgcattgggtcgaagaaaaactggcgttgggc
ggttatgatgcacactggacgccggttttgaccgcatggttggacgccattttgctggcg
cctctcaacgagaccggcgtgagtttgagtcagctttccgcgcgtgaaaaacaggtggag
atggagttttatctgccgatttcgcagccgctgatggccagccaacttgatgcgttgatc
cgccaatacgatccgctttcggctggctgcccgccgctggactttatgcaggtacgcggc
atgctgaaagggtttattgacctggtgttccgccaccaggggcgttattacctgctcgac
tacaagtcaaactggctgggcgaagacagttctgcgtatacccagcaggcaatggcctca
gccatgcaggcgcaccgttacgatctgcagtatcagttgtataccctggcgctgcaccgt
tatctgcgccatcgcattgctgattacgattatgaacgccattttggcggcgttatttat
ctcttcctgcgtggcgttgaccgtgaaaatccgcagcagggaatttacgctacccgaccc
gatggggaattgatcgcgttgatggacgagttgtttgccggtgcggctctggaggagatg
caatga
DBGET
integrated database retrieval system
