Citrobacter sp. FDAARGOS_156: AL515_18715
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Entry
AL515_18715 CDS
T04313
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cif
Citrobacter sp. FDAARGOS_156
Pathway
cif03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AL515_18715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cif03400
]
AL515_18715
Enzymes [BR:
cif01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AL515_18715
DNA repair and recombination proteins [BR:
cif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AL515_18715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AMH15769
LinkDB
All DBs
Position
complement(4003395..4006763)
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AA seq
1122 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEYIVERERLDDPFEPEMILVQSTGMAQWLQMTLAQKFGIAANI
DFPLPASFIWDMFVRVLPDIPKESAFSKQSMSWKLMTLLPQLLDNDDFALLRHYLTDDTD
KRKLFQLSSRAADLFDQYLVYRPEWLTQWEVGLQVEGLGDAQAWQAPLWKALVEYTAELG
QPGWHRANLYQRFIQTLENTSDCPQGLPSRVFICGISALPPVYLQALQALGKHIDIHLLF
TNPCRYYWGDIKDPAYLAKLLARQRRHSFEERHLPLFRDSQNAEGLFNSDGEQDVGNPML
ASWGKLGRDYIYLLSELENSQELDAFVDITPDNLLHNIQADILELENHAVAGVSLEEYSR
SDNKRLLEPNDTSVTFHVCHSPQREVEILHDRLLAMLEADPTLTPRDIIVMVADIDSYSP
FIQAVFGSAPADRYLPYAISDRRARQSHPVLQAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFNINEEGLRYLRLWVNESGIRWGIDDDNVRELALPPTGQHTWQFGLTRMLLGYAMESA
QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNDFFL
PDADTEAAMTLIEQQWQAIITEGLGAEYGEAIPLSLLRDELAQRLDQERISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPRRGDRSRRDDDRYLFLEAL
ISAQQTLYISYIGRSIQDNSERFPSVLVQELMDYIGQSHYLPGDELLTSDQSEAKVKAHI
TRLHTRMPFDAQNYLPGEQQSYAREWLPAASLSGKAHTDFVQPLPFTMPETLTLETLQRF
WAHPVRAFFQMRLRVNFRSEESEIPETEPFILEGLSRYQLNQQLLNTLVEENDAERLFRR
FRAAGALPYGPFGEILWDTQRQEMQTLAERIIACRQPCQSMEIDLTCNGVQITGWLPQVQ
EDGLLRWRPSLISIAQGVQLWLEHLVYCASGGTGESRLFLRKDGEWRFPPLEAEQALQYL
SQLIEGYREGMSSPLLVLPESGGAWIKTCYDAVNDAMLDDDDTLQKARSKFLQAYEGNMM
VRGEGDDIWYQRLWRQLDADTLETIVLQSQRYLLPIFRFNQS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctaccactccaatcgtctggatgtgctggaagcgttgatggaatatatc
gttgagcgcgagcggctggacgacccctttgaacccgagatgatcctggttcaaagcacc
ggtatggcgcagtggttgcaaatgactctggcacagaagtttggtattgccgctaacatt
gatttcccgctgccagcgagttttatctgggatatgtttgtgcgtgtattgccggatatc
ccaaaagagagcgcatttagcaaacagagcatgagctggaagctgatgacgctgctacct
caattgctggataacgacgatttcgcactgctacgccactatctcaccgacgacacagac
aaacgtaagctgtttcagctttcatcacgcgctgcggatctgttcgaccagtatttagtc
taccgtcctgaatggctgacgcagtgggaggtggggctgcaggtggaagggctaggagat
gctcaggcctggcaagcgccattgtggaaagcactggtggaatacacggctgaactggga
cagccaggctggcatcgtgccaatttatatcagcggtttattcagaccctggagaatacg
tctgactgcccacaaggcttgccctcgcgcgtctttatttgtggtatctccgcgctaccg
cccgtgtatctgcaggcattacaagcgctgggtaagcatattgatattcatctgcttttt
accaatccctgtcgttactactggggggatattaaagaccccgcttatctggctaaactg
ttggcgcgtcagcgtaggcatagctttgaagaacgacatttaccgctgtttcgcgatagt
cagaatgctgaaggactgtttaacagcgatggtgagcaggatgtggggaatccgatgttg
gcctcatggggaaaactaggacgtgactacatatatttgctttcggaattggaaaacagc
caggagctggatgcgtttgtcgatattactcctgacaatcttttgcataatattcaagcg
gatattctggaactcgaaaaccatgcggtggcaggagtcagcctggaggagtattcgcgt
agcgacaataaacggttgcttgaaccgaatgatactagtgtgacgtttcatgtctgtcat
agcccacaacgcgaagtggaaatactccacgaccggttgctggcaatgctggaagcggac
ccaacactgacgccgcgcgacatcatcgtgatggtggcggatatcgacagctacagtcca
tttattcaggctgtctttggcagtgcaccggccgatcgttacctgccgtatgctatttcc
gatcgccgggcgcgtcagtctcatcccgtcttacaggcgtttattagcctgctttcgcta
ccggacagccgttttgtctcagaggatgtcctggcattactggatgtgcccgtgctggct
gcgcgtttcaacatcaatgaagaagggttgcgctatcttcgtttgtgggtcaatgaatct
ggaattcgctggggcattgacgacgacaacgtgcgcgaactcgcgcttcctccaactggc
cagcatacctggcaatttggtttaacacgtatgctgctgggctatgcgatggaaagcgca
cagggtgagtggcagtcggtattgccctatgatgagtccagtggtttgattgccgagtta
gtcgggcatttggcctcgttgctgatgcagctaaacatctggcgcagagggttagcacag
gaacgcccgctggaagagtggttacccgtttgccgggacatgcttaatgatttcttcctg
ccggacgcggacaccgaagcggcgatgacgctgattgaacagcagtggcaggccattatc
actgaaggtttgggggccgagtatggcgaggccataccgctgtctctgttacgtgacgaa
ctggcgcagcgtcttgaccaggagcgcattagccagcgtttcctggcagggcctgtcaat
atctgtacgctgatgccgatgcgctctatccctttcaaagtggtgtgcctgttgggcatg
aacgatggcgtttatccgcgccagcttgcgccgctgggatttgatctgatgagccaaaaa
ccgaggcgtggtgaccgaagccgccgtgatgatgaccgctatctgttcctcgaagccctg
atttcggcgcaacaaacgctctatatcagctatatcggccgctcaatccaggataacagt
gagcgcttcccgtcggtgctggtgcaggaacttatggattacattgggcaaagccactat
ttgccgggcgatgaattactcactagcgatcaaagtgaagcgaaagtaaaagcgcacatt
acccgtttacatacccgtatgccctttgatgcacaaaactatctgccaggtgagcagcaa
agttatgctcgagagtggttgccagcggcaagtctgtcaggcaaagcgcacacggatttt
gtccagccgctcccctttacaatgcctgaaaccctgacgctggaaacgctgcaacgcttt
tgggctcatccggtgcgggcgtttttccagatgcgcctgagggtaaatttccgctctgaa
gagagcgaaatcccggaaacagaaccctttatcctcgaagggctcagccgctatcaactt
aatcagcagttgcttaataccctggttgaagagaacgacgctgaacgactgtttcgccgt
tttcgtgcggcgggtgcgcttccctatgggccatttggtgaaattctgtgggatacgcag
cgtcaggagatgcagacgctggctgaacgcattatcgcctgtcgtcagccttgtcagagc
atggaaatcgatcttacctgtaacggcgtgcaaatcaccggttggttgccgcaggtgcaa
gaggacggtttgttgcgctggcgcccatctttgatcagcattgcgcagggtgtgcaactt
tggctggaacatcttgtctattgtgcgagtggcggtacgggagaaagccggttgttctta
cgcaaagacggcgagtggcgtttccctccactggaggccgaacaggcgttacagtatctg
tcgcaacttattgagggatatcgggaaggcatgtcatcgccgctactggtattaccggaa
agtggtggggcgtggataaaaacctgttatgacgccgtaaatgatgccatgttagatgac
gatgatacgttgcaaaaagcgcgcagtaagtttctgcaggcctatgaaggcaacatgatg
gtacgcggtgaaggtgatgacatctggtatcaacgtctgtggcgtcaactggatgctgat
acgctggagaccattgttttacagtctcagcgttacctgttaccgatttttcgatttaat
cagtcgtga
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