Citrobacter sp. FDAARGOS_156: AL515_20645
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Entry
AL515_20645 CDS
T04313
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cif
Citrobacter sp. FDAARGOS_156
Pathway
cif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL515_20645 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cif03019
]
AL515_20645 (pnp)
03016 Transfer RNA biogenesis [BR:
cif03016
]
AL515_20645 (pnp)
Enzymes [BR:
cif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AL515_20645 (pnp)
Messenger RNA biogenesis [BR:
cif03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AL515_20645 (pnp)
Transfer RNA biogenesis [BR:
cif03016
]
Prokaryotic type
tRNA degradation factors
AL515_20645 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
KH_2
aRib
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
DUF4172
Motif
Other DBs
NCBI-ProteinID:
AMH16126
LinkDB
All DBs
Position
complement(4412082..4414214)
Genome browser
AA seq
710 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALTLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQAINELAKEAGKPRWDWQPEAVNE
ALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIATLVAEDETLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTTR
DAQNLDELMGERTDNFLFHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPELDK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAGEPEAPASQGE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggtcagcataccgttacgctggaaacc
ggcatgatggcgcgtcaggcgactgccgctgttatggttagcatggatgacaccgcggta
ttcgttacagttgttggccagaaaaaagcgaaaccaggccaggactttttcccgctgacc
gttaactatcaggagcgtacctacgctgctggccgtatcccgggtagcttcttccgtcgt
gaaggccgtccgagcgaaggcgaaaccctgattgcgcgtctgattgaccgcccggttcgt
ccgctgttcccggaaggcttcgttaacgaagttcaggttatcgccaccgttgtttccgtt
aacccgcaggttaacccagacatcgtggcaatgattggtgcatctgctgcgctgactctg
tctggtattccattcaacggcccgatcggtgctgcacgtgttggttacatcaatgaccag
tacgtactgaacccgactcaggacgaactgaaagaaagcaagctggacctggttgttgcg
ggtactgaagctgccgtactgatggttgaatccgaagctgaactgctgagcgaagaccag
atgctgggcgctgtggtattcggtcacgaacagcagcaggttgttattcaggccatcaac
gagctggcgaaagaagctggcaaaccgcgttgggactggcagccagaagccgtcaacgaa
gcgctgaacgcgcgcgttgccgcactggcagaagctcgcctgagcgacgcttaccgcatc
accgacaaacaagagcgttatgctcaggttgacgtaatcaaatctgaaaccatcgcgact
ctggtggctgaagacgaaaccctggacgctaacgaactgggtgaaattctgcacgctatc
gagaaaaacgttgttcgtagccgcgtactggcaggcgagccgcgcatcgatggccgtgaa
aaagacatgatccgtggcctggacgtgcgtactggcgttctgccgcgtacccacggttcc
gcactgttcacccgtggcgaaactcaggcactggttaccgcgaccctgggcaccactcgt
gatgcacagaacctcgacgaactgatgggcgagcgtactgacaacttcctgttccactac
aacttccctccgtactgcgtaggtgaaaccggtatggtcggttctccgaagcgtcgtgag
attggtcacggtcgtctggcgaaacgtggcgtactggcagtgatgccggaactggataaa
ttcccgtacaccgtgcgtgtggtttctgaaatcaccgaatctaacggttcttcttctatg
gcttccgtatgtggcgcttccctggcgctgatggacgcaggcgtgccaatcaaagccgcc
gttgcgggtatcgcgatggggctggtgaaagaaggcgacaactatgttgttctgtctgac
atcctgggcgacgaagaccacctgggcgatatggacttcaaagtggcgggttcccgcgac
ggtatctctgcactgcagatggatatcaaaattgaaggtatcaccaaagaaatcatgcag
gttgctctgaaccaggctaaaggtgcgcgtctgcacatcctgggtgtgatggaacaagcg
atcaacgcaccgcgtggcgatatctctgaatttgctccgcgtatccacaccatcaagatc
agcccggacaagatcaaagacgttatcggtaaaggcggttctgttatccgtgctctgacc
gaagaaaccggcaccaccattgaaatcgaagatgatggtaccgtgaagattgctgcgacc
gacggcgaaaaagcgaaatatgctatccgtcgtatcgaagagatcaccgcagagatcgaa
gtaggccgtatctacaatggtaaagtgacccgtatcgttgactttggcgcattcgttgcc
atcggtggcggtaaagaaggcctggtacacatctctcagatcgctgataagcgcgttgag
aaagtgaccgattacctgcagatgggtcaggaagtaccggtcaaagttctggaagttgat
cgccagggccgtgtacgtctgagcattaaagaagcaactgagcagtctcagcctgcaggc
gaaccggaagctccggcaagccagggcgagtaa
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