Citrobacter sp. FDAARGOS_156: AL515_20655
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Entry
AL515_20655 CDS
T04313
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cif
Citrobacter sp. FDAARGOS_156
Brite
KEGG Orthology (KO) [BR:
cif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cif03016
]
AL515_20655
Enzymes [BR:
cif01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AL515_20655
Transfer RNA biogenesis [BR:
cif03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AL515_20655
Prokaryotic type
AL515_20655
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AMH16128
LinkDB
All DBs
Position
complement(4415004..4415948)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVVARLGQRTDTSDADGQIVQERPVTFTAEQLASALETFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEVHCSKGTYI
RTIVDDLGEKLGCGAHVTYLRRLTVSKYPVDRMVTLEHLRELVEQAEQQNIPAAQLLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGDDGKFIGMGEMDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgtggtcgcgacattcacggtgttctgctgctggacaaaccg
caaggcatgtccagcaatgacgtactgcaaaaagtaaagcgcatctacaatgccaaccgc
gcgggacataccggcgcgctggatccgctggcgacaggcatgctgccgatttgcctcggt
gaagcgacgaagttttcacagtatttgctggattctgataaacgctatcgtgtggttgcc
cgtctgggccagcgtactgacacctcggatgctgatgggcaaatcgtgcaggaacgtccg
gtaaccttcaccgctgagcagcttgcaagcgcgctggagactttccgcggcgatatcgag
cagatcccgtcaatgtattcggcgctgaagtatcagggtaagaagctgtacgaatatgcg
cgtcagggcattgaagtgccgcgtgaagcgcgcccgattaccgtctatgagctgctgttt
attcgccacgaaggtaacgagctggagctggaagttcactgctccaaaggcacctatatt
cgcaccatcgttgacgatctcggtgagaagctgggctgcggcgcgcacgtaacgtatctg
cgtcgtctgacggtcagcaagtatccggtggatcgtatggtcacgctggagcatctgcgt
gaactggttgagcaggcagaacagcaaaatattccggcggcgcagttgcttgatcctttg
ctgatgccaatggacagtccggcatcagactatccggtagttaatttacctttaacatcc
tcggtttactttaaaaatggtaacccggtacggacgtcaggcgcgccgctggaagggctg
gtccgcgtgacggaaggcgatgacggcaagtttatcggcatgggggagatggacgatgaa
ggtcgtgtcgccccccgtcgcctggtggttgagtatcctgcatag
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