Citrobacter sp. FDAARGOS_156: AL515_21300
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Entry
AL515_21300 CDS
T04313
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cif
Citrobacter sp. FDAARGOS_156
Pathway
cif03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cif00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AL515_21300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cif03021
]
AL515_21300
03400 DNA repair and recombination proteins [BR:
cif03400
]
AL515_21300
Enzymes [BR:
cif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AL515_21300
Transcription machinery [BR:
cif03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AL515_21300
DNA repair and recombination proteins [BR:
cif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AL515_21300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AMH16241
LinkDB
All DBs
Position
complement(4543292..4544281)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDDVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactttgggt
aacgcactgcgccgtattctgctctcatcgatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactacatgagtacagcaccaaagaaggcgttcaggaagatatcctggaa
atcctgctcaacctgaaagggctggcggtgagagttcagggtaaagatgacgttattctt
accttgaataaatctggcattggccctgtgactgcagccgacattacccatgatggggat
gtcgaaatcgtcaagccacagcacgtgatctgccacctgaccgatgagaatgcatctatt
agcatgcgtatcaaagttcagcgcggtcgtggttatgtgccggcttctacccgaattcat
tcggaagaagatgagcgcccaatcggccgtctgctggtcgacgcatgctacagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgacctggacaag
ctggtcatcgaaatggaaaccaacggcacaatcgatcctgaagaggcgattcgtcgtgcg
gcgaccattctggctgaacaactggaagctttcgttgatttacgtgatgtacgtcagccg
gaagttaaagaagagaaaccagaattcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgcctcaaagcagaagctatccactatatcggtgat
ctggtacagcgtactgaggttgagcttcttaagacgcctaaccttggtaaaaaatctctt
accgagattaaagacgtgctggcttcccgtggactgtctctgggcatgcgcctggaaaac
tggccaccggcaagcatcgctgacgagtaa
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