Citricoccus sp. SGAir0253: E7744_03670
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Entry
E7744_03670 CDS
T05972
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
cig
Citricoccus sp. SGAir0253
Brite
KEGG Orthology (KO) [BR:
cig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cig03016
]
E7744_03670
Enzymes [BR:
cig01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
E7744_03670
Transfer RNA biogenesis [BR:
cig03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
E7744_03670
Prokaryotic type
tRNA splicing ligases
E7744_03670
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Hexapep
Motif
Other DBs
NCBI-ProteinID:
QCU77414
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All DBs
Position
812352..813518
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AA seq
388 aa
AA seq
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MEHLTDRLVSWASLLDEQTREQALATARLPFIHPHVALMPDAHLGKGATVGSVIPTLGTV
IPAAVGVDIGCGMIAVRTQFTVADLPEDRARVRRAIERAVPLGAGHDNRTVTPTAAPRLD
ELVERAVAAGLDPAGYAPHWDLQLGSLGSGNHFIEISRDEQDRVWAFLHSGSRGVGNRIA
QHHIGVAAGLARRAGVSLPHPDLAYLEEGTEAFDRYLRELEWAQHFALLNREEMMDRVLR
AVSEWVGTEVRERERINCHHNFTAAEEHFGRRVWVSRKGAIRATAGEPGLIPGSMGTASY
VVAGRGNAMSLDSAPHGAGRAYSRSAARRRFTRRQLREAMAGIEYRDTEAFLDEIPAAYK
PIDRVMADAADLVSVRHTLRQLVNVKGD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggagcacctcaccgaccggctcgtcagctgggcctccctgctggacgagcagacgcgc
gagcaggccctcgccaccgcccgactgccgttcatccacccgcacgtcgccctgatgccg
gacgcccacctcgggaagggggccaccgtgggctcggtgatccccaccctcgggacggtc
atcccggccgccgtgggcgtggacatcggctgcgggatgatcgccgtgcgcacccagttc
acggtcgccgacctgccggaggaccgcgcgagggtccgccgggcgatcgagcgggccgtg
ccgctgggtgccggccatgacaacaggacggtcaccccgacggcggccccgcggctggac
gagctcgtcgagcgggcggtggccgcgggcctcgacccggccgggtacgccccccactgg
gacctccagctggggtcgctgggctcgggcaaccacttcatcgagatctcccgggacgag
caggaccgggtctgggccttcctgcactccggctcccgcggcgtgggcaaccggatcgcg
cagcaccacatcggcgtggccgccggcctggcgcggcgtgccggggtctccctgccgcac
cccgacctggcctatctcgaggagggaaccgaggcgttcgaccggtacctgcgcgagctg
gagtgggcccagcacttcgccctgctcaaccgcgaggagatgatggaccgcgtgctgcgg
gccgtctcggagtgggtgggcacggaggtccgggaacgggaacggatcaactgccaccac
aacttcaccgccgcggaggagcacttcggccgccgcgtctgggtctcgcgcaagggggcc
atccgggccacggcgggcgagcccgggctcatcccgggatccatgggcaccgcctcctac
gtggtggccggccggggcaacgcgatgtccctggactccgcaccgcacggggcgggccgg
gcctactcccgctcggccgcccgccgccggttcacccgccggcagctgcgcgaggcgatg
gccggcatcgagtaccgggacaccgaggccttcctcgacgagatcccggccgcctacaag
cccatcgaccgggtgatggcggacgccgccgacctcgtctccgtccgccacacgctgcgc
cagctcgtcaacgtcaagggcgactga
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