Citricoccus sp. SGAir0253: E7744_03705
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Entry
E7744_03705 CDS
T05972
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cig
Citricoccus sp. SGAir0253
Pathway
cig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E7744_03705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cig03019
]
E7744_03705
03009 Ribosome biogenesis [BR:
cig03009
]
E7744_03705
Enzymes [BR:
cig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E7744_03705
Messenger RNA biogenesis [BR:
cig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E7744_03705
Ribosome biogenesis [BR:
cig03009
]
Prokaryotic type
rRNA helicases
E7744_03705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
adh_short
Motif
Other DBs
NCBI-ProteinID:
QCU79288
UniProt:
A0A4P9JEI9
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All DBs
Position
819680..821515
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AA seq
611 aa
AA seq
DB search
MTVSENTTVPTPAFADLGIDARVLAAVEDLGYETPSPIQAETIPLLLAGRDVVGLAQTGT
GKTAAFAVPALSRLAELADVNGPADSPQVLVLAPTRELALQVAEAFTSYAKHLKGVTVLP
VYGGAPYGPQLSGLRRGAQVVVGTPGRVIDHLEKGSLDLSDLQYMVLDEADEMLRMGFAE
EVDRILAATPSGKQTALFSATMPRAIQRISGKYLNDPVEVTVAAKNTTAGNIRQRFLQVT
HQWKLEAMTRILETEEHDGVIAFVRTRNATEELTTKLNARGFRAAAISGDVAQNQREKTV
ENLRAGRVDILVATDVAARGLDVERISHVINYDIPHDTESYVHRIGRTGRAGRSGDAVLF
MTPREKYLLRSIEKATRQTVEQMHMPSVADVNSSRLGKFSTQITETLSEGDLDVFRELVD
SYVAEHEVAPEDVAAALAKMAQGGRPLLTEEPDLPPVRMARGDRDDRGERDGRGSRGPQR
GPAEGNATYRIALGRQDRVQPGNIVGALANEAGLRSNQIGHIDIRSNHSLVELPADLTGQ
QWDALGNTTINGRPIELQLDTGRPTRAEREGKPFRSGGGSKGGFKGGHKGGGFKGGFKGR
KSFDRPSRDRY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atcaccgtgtccgagaacaccaccgtgcccacccctgccttcgccgacctcggcatcgac
gcccgcgtgctcgccgccgtcgaggacctcggctacgagaccccctcgccgatccaggcc
gagaccatcccgctgctgctcgccgggcgcgacgtcgtcggcctggcccagaccggcacc
ggcaagaccgcggccttcgccgtgcccgccctgtcccggctcgccgagctcgcggacgtc
aacggccccgcggacagcccccaggtcctcgtgctggcccccacgcgcgagctggccctg
caggtcgccgaggccttcaccagctacgccaagcacctcaagggcgtcaccgtgctgccc
gtgtacggcggcgcgccctacggcccgcagctgtccggcctgcgccgcggcgcccaggtc
gtggtcggcacccccggccgcgtgatcgaccacctcgagaagggctccctggacctgtcc
gacctgcagtacatggtcctggacgaggccgacgagatgctgcgcatgggcttcgccgag
gaggtcgaccgcatcctggccgccacgccctccggcaagcagacggcgctgttctcggcc
accatgccgcgcgccatccagcggatctccggcaagtacctcaacgacccggtcgaggtg
accgtggccgccaagaacaccaccgccggcaacatccgccagcgcttcctgcaggtgacc
caccagtggaagctcgaggccatgacccgcatcctcgagaccgaggagcacgacggcgtc
atcgccttcgtgcgcacccgcaacgccaccgaggagctcaccaccaagctcaacgcccgc
ggcttccgcgccgcggcgatctccggcgacgtcgcgcagaaccagcgcgagaagaccgtg
gagaacctgcgcgccggccgcgtggacatcctcgtggccacggacgtggccgcccgcggc
ctggacgtggagcgcatcagccacgtcatcaactacgacatcccgcacgacacggaatcc
tacgtgcaccgcatcggccgcaccggccgcgcgggccgctccggggacgccgtgctgttc
atgaccccgcgggagaagtacctgctgcgctccatcgagaaggccacgcgccagaccgtc
gagcagatgcacatgccctccgtggcggacgtgaactcctcccgcctgggcaagttcagc
acccagatcaccgagaccctctccgagggcgacctggacgtgttccgcgagctcgtggac
tcctacgtggccgagcacgaggtggcccccgaggacgtcgccgcggcgctggccaagatg
gcccagggcgggcgcccactgctcaccgaggagccggacctgccgccggtgcgcatggcc
cgtggcgaccgcgacgaccgcggcgagcgggacgggcgcggctcgcgcggcccccagcgc
ggcccggccgagggcaacgccacctaccggatcgcgctgggccgccaggaccgcgtccag
ccgggcaacatcgtcggcgcgctggccaacgaggccgggctgcgctcgaaccagatcggg
cacatcgacatccgctccaaccactccctcgtggagctgccggcggacctgaccggccag
cagtgggacgccctgggcaacaccaccatcaacggccgtccgatcgagctgcagctggac
accggccggcccacgcgcgccgagcgcgagggcaagccgttccgctccggcggcggctcc
aagggcggtttcaagggcggccacaagggcggcggcttcaagggcggtttcaagggcagg
aagtccttcgaccgcccctcccgcgaccggtactga
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