Citricoccus sp. SGAir0253: E7744_06325
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Entry
E7744_06325 CDS
T05972
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cig
Citricoccus sp. SGAir0253
Pathway
cig03030
DNA replication
cig03430
Mismatch repair
cig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E7744_06325 (dnaE)
03430 Mismatch repair
E7744_06325 (dnaE)
03440 Homologous recombination
E7744_06325 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cig03032
]
E7744_06325 (dnaE)
03400 DNA repair and recombination proteins [BR:
cig03400
]
E7744_06325 (dnaE)
Enzymes [BR:
cig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E7744_06325 (dnaE)
DNA replication proteins [BR:
cig03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E7744_06325 (dnaE)
DNA repair and recombination proteins [BR:
cig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E7744_06325 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QCU77847
UniProt:
A0A4P9J9V9
LinkDB
All DBs
Position
1406942..1410532
Genome browser
AA seq
1196 aa
AA seq
DB search
MTATTAARGATREGGFAHLHTHTEYSMLDGAAKLTELFAETERLGMDSIAITDHGYLFGA
FDFWKKATDAGIRPIIGLEAYLAPGQQHRTDKTKVRWGEQHQRGDDVSGGGAITHMTLLA
KDNTGMHNLFRAGSIASLDSVYAKWPRIDRELLSTYSKGLIGTTGCPSGEVQTRLRLGQY
KEAVEAAAEFRDIFGKGNFYCELMQHGLDLEKRVVPDLLRLAKDLDLPLVATNDLHYTHE
HDAKPHEALLAIQSGSTLLEPTYDQGGSRFAFTGTEFYLKSPRQMRDLFAEFPEACDNTL
LIAEQCEVSFDTSANYMPRFPCPPGEDETSWLTKEVATGLKYRYPDGVPDHVRKQADYEL
DVIISMGFPGYFLVVADFINWAKDHGIRVGPGRGSGAGSMVAYALRITELDPLEHGLIFE
RFLNPDRVSMPDFDVDFDDRRRPEVIDYVTEKYGDERVAMIVTYGTIKTKQALKDSARVM
GFPFSMGETLTKALPPAVMAKDIPLKDIEDKDAPRYGEAAEFRELVASDPDAAKVFETAK
GVEGLKRQWGVHAAGVIMSSEPIIDVIPIMRRMQDGQVITQFDYPTAEGLGLIKMDFLGL
RNLTIISDAIENIRANQGFELDLESLDFDDQPSYELLARGDTLGVFQLDGGPMRSLLKMM
KPDNFEDISATIALYRPGPMGANSHTNYALRKNGQQEITPIHPELEEPLREILDTTYGLI
VYQEQVMAIAQKVAGYSLGQADILRRAMGKKKKSELDKQYVGFHQGMIDRGYSEAAVKAL
WDILLPFSDYAFNKAHSAAYGLVSYWTAYLKAHYPAEYMAALLTSVGDDKDKMAMYLNEC
RRMGITVLPPDVNESSLYFTPVGRDIRFGMAAVRNVGSNVVTAMVSAREEKGAFASFQDF
FKKVPAVVCNKRTIESLIKAGAFDSLGYARRALLAIHEEAVDATVAQKRQEANNQFDFFS
ILEEEGGEAADAGLGIEVPDLPEWDKKDKLSFEREMLGLYVSDHPLQGLDGVLAQHADTS
ITHVLSEDGPADGAQVTIAGLITSLQRRIAKSSGNAYARCEIEDLGGSMEVMFFGQAYAP
IATLLAEDLVVAVKGRVQRRDDGSITLSAQELTIPDLSDGHTGPVSITMPAFKANETVVS
ALGDVLRTHPGTTEVRLRLAGTRTMEIMQLGPDFRVSPNPALFGDLKVLLGPACLE
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgaccacagcagcacgaggggccacgcgggagggcgggttcgcccacctgcac
acgcacaccgagtactccatgctggacggggcggccaagctcacggaactgttcgccgag
acggagcgcctcggcatggactcgatcgccatcacagaccacgggtacctgttcggcgcc
ttcgacttctggaagaaggccaccgacgccggcatccggccgatcatcggcctcgaggcc
tacctggccccgggccagcagcaccgcaccgacaagaccaaggtgcggtggggcgagcag
caccagcgcggggacgacgtctccggcggcggcgccatcacccacatgacgctgctggcc
aaggacaacaccggcatgcacaacctgttccgggccgggtcgatcgcctccctggactcc
gtgtacgccaagtggccgcgcatcgaccgcgaactgctctccacctactcgaagggcctc
atcggcaccacgggctgcccctccggcgaggtgcagacgcgcctgcgcctgggccagtac
aaggaggcggtggaggccgccgcggagttccgggacatcttcggcaagggcaacttctac
tgcgagctgatgcagcacgggctggacctggagaagcgcgtggtgccggacctgctgcgc
ctggccaaggacctggacctgccgctcgtggccacgaacgacctgcactacacgcatgag
cacgacgccaagccgcacgaggcgctgctggccatccagtccggctccaccctgctcgag
cccacgtacgaccagggcggctcgcggttcgccttcaccggcaccgagttctacctcaag
tccccgcggcagatgcgcgacctgttcgccgagttccccgaggcctgcgacaacacgctg
ctgatcgccgagcagtgcgaggtctcgttcgacacgagcgccaactacatgccccggttc
ccctgcccgccgggggaggacgagacgagctggctgaccaaggaggtcgccaccggcctg
aagtaccggtacccggacggcgtgccggaccacgtgcgcaagcaggccgactacgagctc
gacgtcatcatctcgatgggcttcccgggctacttcctcgtggtcgccgacttcatcaac
tgggccaaggaccacggcatccgcgtgggccccggccgtggctccggcgccggctccatg
gtcgcctacgccctgcgcatcaccgagctcgacccgctcgagcacggcctgatcttcgag
cgcttcctcaacccggaccgcgtgtccatgcccgacttcgacgtcgacttcgacgaccgc
cgccgccccgaggtgatcgactacgtcaccgagaagtacggcgacgagcgcgtggccatg
atcgtcacctacggcaccatcaagaccaagcaggcgctgaaggactccgcgcgcgtgatg
ggcttcccgttctccatgggcgagacgctgaccaaggccctgcccccggcggtcatggcc
aaggacatcccgctcaaggacatcgaggacaaggacgccccgcgctacggcgaggcggcg
gagttccgcgaactggtggccagcgacccggacgcggccaaggtcttcgagacggccaag
ggcgtcgaggggctgaagcgccagtggggcgtgcacgccgccggcgtgatcatgtcctcg
gagccgatcatcgacgtcatcccgatcatgcgccgcatgcaggacggccaggtcatcacg
cagttcgactaccccaccgcggaggggctcgggctgatcaagatggacttcctgggcctg
cgcaacctcaccatcatctcggacgcgatcgagaacatccgggccaaccagggcttcgag
ctggacctggagtccctggacttcgacgaccagccctcctacgagctgctcgcccgcggc
gacaccctcggcgtgttccagctcgacggcgggcccatgcgctcgctgctgaagatgatg
aagccggacaacttcgaggacatctcggcgaccatcgcgctctaccgccccgggccgatg
ggcgcgaactcgcacacgaactacgcgctgcgcaagaacggccagcaggagatcaccccg
atccaccccgagctggaggagccgctccgggagatcctggacaccacgtacggcctgatc
gtgtaccaggagcaggtcatggccatcgcccagaaggtggccgggtactcgctcggccag
gcggacatcctgcgccgcgccatgggcaagaagaagaagtcggagctggacaagcagtac
gtcggcttccaccagggcatgatcgaccgcgggtactccgaggcggccgtgaaggccctg
tgggacatcctgctgccgttctcggactacgcgttcaacaaggcgcactccgccgcctac
ggcctcgtgtcctactggaccgcctacctcaaggcgcactacccggccgagtacatggcc
gcgctgctcacctccgtgggcgacgacaaggacaagatggcgatgtacctcaacgagtgc
cgccgcatgggcatcacggtgctgcccccggacgtcaacgagtcctcgctgtacttcacc
ccggtgggccgggacatccgcttcggcatggccgccgtgcgcaacgtggggtccaacgtg
gtcacggccatggtgtccgcgcgcgaggagaagggcgccttcgcctcgttccaggacttc
ttcaagaaggtgcccgccgtggtctgcaacaagcggaccatcgagtcgctcatcaaggcc
ggtgccttcgactcgctcgggtacgcgcggcgcgccctgctggcgatccacgaggaggcg
gtggacgccaccgtggcgcagaagcgccaggaggccaacaaccagttcgacttcttctcg
atcctcgaggaggagggcggcgaggccgcggacgccggcctcgggatcgaggtcccggac
ctgcccgagtgggacaagaaggacaagctgtccttcgagcgggagatgctcggactgtac
gtctccgaccacccgctgcaggggctggacggcgtgctggcccagcacgccgacacctcc
atcacgcacgtcctgtccgaggacggccccgccgacggcgcgcaggtcaccatcgccggg
ctcatcacctcgctgcagcggcggatcgcgaagagctcgggcaacgcctatgcccgctgc
gagatcgaggacctcggcggctccatggaggtcatgttcttcggccaggcgtacgcgccg
atcgccaccctgctcgccgaggacctcgtcgtggcggtcaagggccgcgtgcagcgccgg
gacgacggctccatcaccctcagcgcccaggagctgaccatcccggacctctcggacggg
cacaccgggccggtgtccatcacgatgccggcgttcaaggcgaacgagacggtggtctcg
gcgctgggggacgtcctgcggacgcacccgggcaccacggaggtccggctgaggctcgcc
gggacccggaccatggagatcatgcagctcgggccggacttccgggtcagcccgaacccc
gccctgttcggcgacctcaaggtgctcctcgggccggcctgcctcgagtga
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