Citricoccus sp. SGAir0253: E7744_06430
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Entry
E7744_06430 CDS
T05972
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
cig
Citricoccus sp. SGAir0253
Brite
KEGG Orthology (KO) [BR:
cig00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
E7744_06430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cig03021
]
E7744_06430
Transcription machinery [BR:
cig03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E7744_06430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Hydrolase_like
Motif
Other DBs
NCBI-ProteinID:
QCU77864
LinkDB
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Position
1435447..1436730
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AA seq
427 aa
AA seq
DB search
MTTSSQKTESQGGAAAEDAVAQGQGGAAAGASTRKSTSSSRATKTAAAGTRKTTKKSAAK
SAGAKSAAGKSGATSADDAVEPDEEPTDVPANAAEEEPEEETSAGGFVVSDADDDAPVQQ
VVSAGATADPVKDYLKQIGKVALLNAEQEVDLALRIEAGLYAEHKMKEQPIKDARLRRDM
ELIIADGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGF
KFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAK
ELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLH
SVLDTLAEREAGVVAMRYGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQ
VLRDYLD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgactacttcttcccagaagaccgagagccagggcggcgcggccgccgaggacgcggtg
gcccagggccagggcggcgcggccgccggcgcgtccactcggaagtccacgtcctcctcg
cgggccacgaagacggctgccgccggcactcgcaagaccaccaagaagtccgccgccaag
tcggcgggcgccaagtccgccgccggcaagtccggggccacgtccgcggacgacgccgtg
gagccggacgaggagcccacggacgtccccgcgaacgccgccgaggaggagcccgaggag
gagacctccgcgggcggcttcgtcgtgtccgacgcggacgacgacgcccccgtgcagcag
gtcgtctccgccggtgccacggccgacccggtcaaggactacctcaagcagatcggcaag
gtcgcgctcctgaacgccgagcaggaggtggacctggcgctgcgcatcgaggccggcctg
tacgccgagcacaagatgaaggagcagcccatcaaggacgcccgcctgcggcgggacatg
gagctgatcatcgctgacggccggcgggcgaagaaccacctgctggaggccaacctgcgc
ctcgtcgtgtcgctggccaagcgctacacggggcgcggcatgctcttcctggacctcatc
caggagggcaacctcggcctgatccgcgcggtggagaagttcgactacaccaagggcttc
aagttctccacctatgccacctggtggatccgccaggcgatcacgcgggccatggccgac
caggcccgcaccatccgcatccccgtgcacatggtcgaggtcatcaacaagctggcccgc
gtccagcgccagatgctccaggacctgggccgcgagcccaccccggaggagctggccaag
gagctcgacatgacccccgagaaggtcgtcgaggtccagaagtacggccgcgagcccatc
tccctgcacaccccgctcggcgaggacggcgactccgagttcggcgacctcatcgaggac
tccgaggccgtcgtgcccgccgacgccgtgagcttcacgctgctgcaggagcagctgcac
tccgtgctggacaccctcgccgagcgcgaggccggcgtggtggccatgcgctacgggttg
acggacgggcagccgaagaccctggacgagatcggcaaggtctacggcgtcacgcgcgag
cgcatccgccagatcgagtccaagaccatgtccaagctgcgccacccctcccggtcccag
gtgctgcgcgactacctggactga
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