Chryseobacterium sp. IHB B 17019: ATE47_04605
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Entry
ATE47_04605 CDS
T04193
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cih
Chryseobacterium sp. IHB B 17019
Pathway
cih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ATE47_04605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cih03400
]
ATE47_04605
Enzymes [BR:
cih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATE47_04605
DNA repair and recombination proteins [BR:
cih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ATE47_04605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
WHD_PriA_bact
Cas3-like_C_2
HTH_65
DUF7129
HMUDK_HMUD1
AAA_19
SIR2
RecA_N
Motif
Other DBs
NCBI-ProteinID:
ALR29847
LinkDB
All DBs
Position
1007633..1010080
Genome browser
AA seq
815 aa
AA seq
DB search
MNYAQIVLPLNLKGSFTYKVPHELLTEIQVGMRVLVPFGGKKIYTGIVFELHDMAPENFV
AKEVISILDDQPIVPQEQINFWNWLSDYYLCGLGEIYRFAFPSSLKLESETYLKLKPNVT
VDFENLDVNEMYLIQALEVRQLINLTDIEAFVPKKDIIKTINSLIDLQYIEIDEKIAEKY
KAKEIAYVKINNEVLNNQNLTEILLKLNKAPKQKDLFLNILEKQTENPDLHIKKSELFED
GYFASSHFKALADKNLIEEYYIQKDRIAGYEGEIEEIEELSEAQKNAKIEVDEAFDEGKN
VLLHGVTSSGKTHIYLEKIEECINEGKNVLFLLPEISLTKQITQRLEKKYGRQLTFYHQK
LTDFERVEVWRRVKQNDFKILIGTRNALFLPFQNLGLIVVDEEHDSAYKPREVSPYFNAK
DAALVLGNFYGAKVILGSATPSVESYYNARKDKMAYVFLQERFGNVNLPEYELINFKEAQ
DSKKVSGNFSLHLIDEIKKTLEEKNQTIILHNRRGYANVIECETCGYVNYCSNCDVVMTY
HKSANEMKCHYCGQRASKPKTCPKCHSENLNERGVGVEQIHEEVSKLFPDNEVDRMDVDS
MRKKFAYEKLYEKIEDRETDIVVGTQMISKGLDFDHIELVAIPKADSLLYVQDFRAEERA
YQLITQVSGRAGRVSGNGKILIQTYNPDHSVFQLIKMNSPARIYKYFLTERQKFHYPPFT
KLIMIELKHRKEEKVNRASQFLGSILRKYLPEDCVLGPEKAQIARLNNLYQFQIMLKLPR
GKKYEEYKKLVLISLKEFEEITAYQSIKKDVFVDF
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
ttgaactacgctcaaatcgttttaccattaaatttaaaaggatcttttacctacaaagtt
ccccacgaattattgactgaaattcaggtaggaatgagggttttggttccgtttggaggg
aagaaaatttataccggaattgtttttgagcttcatgatatggcaccggaaaatttcgtt
gcaaaagaagtcatcagcattttggatgatcaaccgattgttccgcaggagcagatcaac
ttctggaactggctttcagattattatctgtgtggattgggtgagatttaccgttttgcg
tttccttcctctttaaaactggaaagtgaaacctatttaaaattaaaaccgaacgtaacg
gtagattttgaaaatctggatgtgaatgaaatgtatcttattcaagctctggaggttcgg
cagctgattaatctgacggatattgaagctttcgttccgaaaaaagatattattaaaacg
atcaattctttgatcgatttgcaatatattgaaattgacgaaaagattgcggaaaaatat
aaagcaaaagagattgcgtatgttaaaattaataatgaagttttaaataatcagaacctc
acggaaattcttttaaaactaaataaagctccgaaacagaaagatcttttccttaatatt
ttagaaaaacagacagaaaatcctgatttgcacattaaaaaatccgagctttttgaagac
ggatattttgcaagctcacattttaaagctttagcagataaaaatttgattgaagaatac
tatattcaaaaagacaggatagcgggctatgaaggtgagattgaagagattgaagaactc
tccgaagctcagaaaaatgcaaaaattgaagttgatgaagcttttgatgaaggtaaaaac
gttttgcttcacggggtaacttcatccggaaaaacgcatatttatttagaaaaaattgaa
gaatgtattaatgaaggaaaaaacgtcttgtttttgcttcctgaaatttctttaacaaaa
cagattacccaaagattagaaaaaaaatacggcagacagctgactttttatcatcagaaa
ttaactgattttgagagagtagaggtctggaggagagtcaaacaaaatgattttaaaatc
cttatcgggacaagaaatgcactgtttttacctttccagaatctaggtctgattgttgtg
gatgaagagcatgattccgcctataaacccagagaagtttcaccatattttaatgctaaa
gatgcagcattggttttgggaaatttttacggtgcaaaagtgattctcggttctgcaacc
ccttcagttgaaagctattacaatgcccggaaagataaaatggcttatgttttccttcag
gaacgtttcgggaatgtgaatcttcctgaatatgagttgattaattttaaagaagctcag
gattccaaaaaagtttccggaaatttttctttgcatttaattgatgagatcaagaaaacg
ctcgaggaaaaaaatcagaccattatacttcataaccgccgtggttatgccaatgtgata
gaatgtgaaacctgtgggtatgtgaattattgctcaaattgcgatgttgttatgacgtat
cacaagtcggccaatgaaatgaaatgccattactgcggacaaagagcatcaaagccaaaa
acctgcccgaaatgtcactcagaaaatcttaacgaaaggggagtcggagtagagcagatt
catgaagaagtatcaaaattattccctgataatgaggttgacagaatggatgtggattcc
atgcggaaaaaatttgcctacgaaaaattatatgaaaaaatagaagaccgcgaaacagat
attgtggtcggaacccaaatgatttccaaaggattggattttgatcatattgaattggtg
gccattccaaaagcagattccttgttgtatgtccaagatttccgtgcagaagaaagagcg
tatcagctgattactcaggtttcaggacgggctggacgagtttccggaaacgggaaaatt
ttaatccaaacatataatccggatcattctgtttttcagttgattaaaatgaacagtccg
gcaaggatttataaatatttcttaactgagcgccagaaattccattatccgcctttcaca
aaattgatcatgattgagcttaaacacaggaaagaagaaaaagtaaatcgcgcttcccag
tttttaggttcgattttaaggaaatatcttcctgaagattgtgttttggggccggaaaaa
gcacagattgcaaggcttaataatttgtatcaatttcaaatcatgcttaagcttccgaga
ggcaaaaagtacgaagaatacaaaaagctggttttgataagtctaaaagaatttgaagaa
atcaccgcttatcaaagcattaaaaaagacgtttttgtggatttttaa
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