Chryseobacterium sp. IHB B 17019: ATE47_04820
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Entry
ATE47_04820 CDS
T04193
Symbol
gyrB
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cih
Chryseobacterium sp. IHB B 17019
Brite
KEGG Orthology (KO) [BR:
cih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cih03032
]
ATE47_04820 (gyrB)
03400 DNA repair and recombination proteins [BR:
cih03400
]
ATE47_04820 (gyrB)
Enzymes [BR:
cih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ATE47_04820 (gyrB)
DNA replication proteins [BR:
cih03032
]
Prokaryotic type
DNA Topoisomerases
ATE47_04820 (gyrB)
DNA repair and recombination proteins [BR:
cih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ATE47_04820 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ALR29887
LinkDB
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Position
1050860..1052794
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AA seq
644 aa
AA seq
DB search
MSQKQYTASSIQALEGMEHVRMRPSMYIGDVGLRGLHHLVYEVVDNSIDEALAGYCDTIF
VAIKEGNGIEVSDNGRGIPVDFHEKEQKSALEVVMTKIGAGGKFDKDSYKVSGGLHGVGV
SCVNALSNEMVTTVYRDGNVYQQIYSKGKAQTQVEEIGHSDKRGTKQFFQPDDTIFTELV
YNYDTLATRLRELSYLNKGITITLTDERERLEDGTFKTEVFHSEGGLKEFVEFIDGSRES
IMESVIFMEAEKDDIPVEVAMRYNTSFSENLHSYVNNINTHEGGTHLAGFRRALTRTLKK
YADDLGIPAKEKVEITGDDFREGLTAVISVKVMEPQFEGQTKTKLGNSEVSGAVDKIVGE
MLTNFLEENPNEAKIIVQKVVLAAKARQAAKKAREMVQRKSPMGGSGLPGKLSDCSSKDP
AESELFLVEGDSAGGTAKQGRDRFFQAILPLRGKILNVEKSMLHKVYDNEEIKNIYTALG
VTVGTEEDSKALNMAKLRYHKIVIMTDADIDGSHISTLILTFFFRFMKELIENGYIYIAQ
PPLYLLKKGNKKVYAYNEKEREEFTLEMSPDGKGVEVQRYKGLGEMNPEQLWETTLNPEH
RILKQVTIDNAVEADSVFSMLMGDEVPPRREFIEKNAKYAKIDA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaaacagtatacagctagtagtattcaggcattggaagggatggagcacgtt
cgtatgcgtccttcaatgtacattggtgatgtgggattgagaggtctccatcatttggtt
tatgaagtagtagataactctattgatgaagcgttggcaggatactgcgatacgatcttc
gttgctattaaagaaggaaacggaatcgaagttagcgataacggtaggggtattccggta
gatttccacgaaaaagaacaaaaatctgctcttgaggttgtaatgaccaaaatcggggcc
ggtggtaagttcgacaaagattcttataaggtttccggaggtcttcacggagttggggta
tcgtgtgtgaatgcgctttccaatgaaatggtgacaaccgtttacagagacggaaacgtt
tatcagcagatatattccaaaggaaaagcacaaactcaggttgaagaaatcgggcacagt
gataaaagaggaactaaacagtttttccagccggatgatactatttttacagaattagtt
tacaattacgatacgttggcaacccgtttaagagagctttcttatcttaataaaggaatt
accatcacacttaccgacgaaagagaaaggttggaagatggtactttcaaaactgaagtt
ttccactctgaaggtggtctaaaggaattcgtagagtttatcgatggaagcagggaatcc
attatggaaagtgtaattttcatggaagcggaaaaagatgatattcctgtagaagttgct
atgcgttataatacgtcattcagtgaaaatcttcactcttacgttaataatatcaatact
cacgaaggaggtactcacttagcaggtttcagacgtgctttgacgagaactttgaaaaaa
tatgcggatgatcttggtattccggcaaaggaaaaagtagaaattacaggagacgatttc
cgtgaaggattaactgccgtaatttccgtgaaagtaatggaacctcagtttgaaggacag
acaaaaacgaaattaggaaactccgaagtttcaggtgctgtggataaaattgtaggtgaa
atgcttacaaacttcctggaagaaaatcctaatgaagcaaaaattattgttcagaaagtt
gttttagcggcaaaagcaagacaggcagcgaaaaaagcccgtgaaatggttcagagaaaa
tccccgatgggaggttccggacttccgggaaaattatctgactgttcatcaaaagatccg
gcagaatctgaattattcttagtagagggagattcggcaggtggaacggcaaaacaaggt
cgtgacagatttttccaggcgatccttccgttgagaggtaaaatcctgaacgttgaaaaa
tctatgcttcataaagtatatgataacgaagaaatcaagaatatctatacagctcttggt
gttactgtaggaacagaggaggacagcaaagcattgaatatggcgaagttaagataccat
aagatcgtaatcatgaccgatgccgatattgatggttctcacatttctactcttattctt
actttcttctttagatttatgaaagaactgattgagaacggatatatttatatcgctcag
ccacctttatatttattgaaaaaaggaaacaaaaaggtttacgcctataacgaaaaagag
cgtgaagagtttactttagagatgtctcctgatggaaaaggtgttgaggttcagcgttat
aaaggtcttggagagatgaaccctgagcagctttgggaaactactcttaatcctgaacac
agaatcttaaagcaggtaactattgacaatgcggtggaagcagacagtgttttctcaatg
ttgatgggagatgaggttcctccaagaagggaatttatcgagaagaatgcaaaatatgcg
aaaattgatgcataa
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