Chryseobacterium sp. IHB B 17019: ATE47_05330
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Entry
ATE47_05330 CDS
T04193
Name
(GenBank) preprotein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
cih
Chryseobacterium sp. IHB B 17019
Pathway
cih02024
Quorum sensing
cih03060
Protein export
cih03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ATE47_05330
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ATE47_05330
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ATE47_05330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cih02044
]
ATE47_05330
Secretion system [BR:
cih02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ATE47_05330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
DUF3165
Motif
Other DBs
NCBI-ProteinID:
ALR29980
LinkDB
All DBs
Position
1169958..1172867
Genome browser
AA seq
969 aa
AA seq
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MQGKGLITIVAIVLGLICLNELLPTWYASKIEKQATAVAGDNPEKYQKEIARLSKDTLNL
GFTKLYYSKAKDKEMKLGLDLKGGINVLLEINQRDLVNDLTNYSTNPVLIEALNKTDEVQ
KNSTKSYIDNFFDQFDVINKAKGTNLKLADPELFGNTTLTEVKYNTPDEQVKSIVKRKID
ASVGTAFEVIRTRIDKMGAVQPNVQRVPGTARISVEMPGMKDIDKVKKMLQTSAKLQFWE
VQQVPEMAPYFQTLTSIVAAKGDSMGVAKTTNFMGLLHLDKLRTNGVANVKLSDTAAVNK
ILNSKVAQSLRPANIKYTQFMWGYKPEATDEESLVLYAIRGNINQKAPVDGAVETASIGY
DELSRVVVDMQMDSKGAKEWKTLTEKNVGKPVAVTLDNRVYTAPNVVNAIPNGRTQISGN
FSQEEAKELVDVLGAGKLPAGAKVVQATVVGPSLGQESIDAGVMSFGIAFLLIIVYIIFY
YGGAGVYAVIAMIINLFYIFGIMDSVDATLTLPGIAGIVLTMAMAVDTNVIIYERTKEEL
FAGKSILEAYKDGFKHALSAIVDGHLTTLLTAGVLFLFGTGPIKGFALTLGIGILMTFFT
SVLISRAMIFSRLNKGKTISVWTGATKNLFRNTWIDFIGKRKYAYIISAVLTIVSIASIA
INGFKYGIDFTGGRNYVVRFDKAVNAEDIEGKLVTIFKTEDGKNSSVEAKTFGNDRQLKI
STDYLIDDESLKADQTVEQKLYEGLKSSLPANMTMKDFKSADKEHAGIISSEKVGPTVAD
DIKTHGILAVIAALAGIFIYILVRFRKWQFSLGAVAALFHDAVIILGAYSLLHKFMPFNM
EINQDFVAAILTVLGYSINDTVIIFDRIREYLREKKSLTLAGLFDDSISSTLGRTFNTSF
TTIMVILAIFIFGGDNLRGFMFAMLIGIGFGTYSSIFIASAIAYDFLKTGKEEEVHGKTT
TSKEVLASK
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaaaaggacttattacaattgttgctattgtactagggttgatttgcttaaac
gagctattaccaacttggtacgccagcaaaattgaaaagcaggcgactgctgttgcagga
gacaatccggagaagtatcagaaagaaatcgcaagactttctaaggatacactgaatctt
ggattcacaaaactttattattctaaagccaaagacaaggaaatgaaacttggtcttgac
ctgaaaggggggatcaacgttcttttggaaatcaaccaaagggatcttgtaaatgattta
acaaattattctacaaacccggtccttatcgaagctttaaacaaaactgatgaagttcag
aagaattctacaaaatcttacatcgacaatttcttcgatcagtttgatgtaattaacaaa
gcaaaaggtaccaaccttaagcttgcagatccggaacttttcgggaatacaacgcttaca
gaggtgaagtacaatacacctgatgagcaggtaaaaagcattgttaaaagaaaaatcgat
gcttctgtaggaacagcttttgaggtaatcagaaccagaattgacaaaatgggtgcggtg
cagccaaacgttcagagagtacctggaacagctagaatttctgtggaaatgcctggtatg
aaggatatcgataaggtgaagaaaatgcttcagacttccgcaaaacttcagttctgggaa
gtacagcaagttcctgaaatggcgccttatttccagacccttacatcaatagtggctgca
aaaggtgattccatgggtgttgcgaagactacaaacttcatgggccttttacaccttgac
aaattaagaacaaatggtgttgccaacgtaaaactttctgatactgctgctgtgaacaaa
attctaaacagcaaagtagctcagtctctacgtccggctaacattaaatatacccaattc
atgtggggttacaaacctgaagctactgatgaagaaagcttggtattgtatgcgatcaga
gggaatatcaaccaaaaagctcctgtagacggtgctgttgaaaccgcaagcatcggatac
gatgagttaagcagagtagtggtagacatgcagatggattccaaaggtgctaaagaatgg
aagactctaacggagaaaaacgttggaaaaccggttgctgtaacacttgataacagagta
tacactgccccgaacgttgtaaatgcaattcctaacggaagaactcagatttccggtaac
ttctctcaggaagaagctaaagaattggtagacgttttaggtgctggtaaattaccggca
ggtgcaaaagtggttcaggctacagttgtaggaccttcattaggacaagagtctattgat
gcgggggtaatgtctttcggtatcgcattcttattgattatcgtttatatcattttctat
tacggtggtgcaggggtgtacgctgtaatcgcgatgattatcaacttattctatatcttc
gggattatggattccgtagatgctacacttacgcttcctggtatcgcgggtattgtactt
acaatggcgatggcggtcgacacgaacgtaattatctatgaaagaactaaagaagaactt
ttcgctggaaaaagtattcttgaagcatataaagacggtttcaaacatgccttaagtgca
attgtggatggtcacttaacgacgttgttaacagcgggagtacttttccttttcggaaca
gggcctatcaaaggttttgcattgacattaggaatcggtatcttgatgacattctttact
tcggtattgatttcaagagcaatgatcttctccagattgaataaaggaaaaaccatttct
gtttggacaggtgctacgaaaaatcttttcagaaacacatggatcgattttattggaaaa
agaaaatatgcttacatcatttctgctgttcttactatagtttctatcgcatctattgca
atcaacggattcaaatacggtatcgactttacaggaggtagaaattatgtggtaagattt
gataaagctgttaatgctgaagatatcgaaggtaaattggttacaattttcaaaactgaa
gacggtaaaaactcttctgttgaagccaaaacttttggtaatgacaggcagctgaaaatt
tctacagattaccttattgatgatgaatctttaaaagctgaccagactgttgagcagaaa
ttatatgaaggattaaaatccagcttacctgcaaacatgacgatgaaagatttcaagtct
gcagataaagagcatgcagggatcatttcttctgaaaaagtaggaccaacagtggcagat
gatatcaaaactcacggtattcttgctgtaattgcggctttagcgggtattttcatttat
atcttggtaagatttagaaaatggcagttctcacttggtgctgttgcggcgttattccac
gatgcggttatcattttgggagcgtattcactgcttcacaaattcatgccgttcaatatg
gagatcaatcaggatttcgttgcggcgatcctgacggtattaggttactcgatcaatgat
acggtaattatcttcgacagaattagagagtatttaagagagaagaaatcattaacattg
gcaggattattcgatgactctatttccagtacattgggtagaacgttcaacacgtcattt
actacaattatggtaattttagcgatcttcattttcggtggagataacttgagaggattc
atgtttgcgatgttgatcggtatcggattcggtacttactcatccatctttattgcttcg
gcgattgcttatgacttcctgaaaaccggtaaggaagaagaagttcatggtaaaacaacg
acgagcaaagaagtacttgcttcaaaataa
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