Chryseobacterium sp. IHB B 17019: ATE47_05470
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Entry
ATE47_05470 CDS
T04193
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cih
Chryseobacterium sp. IHB B 17019
Pathway
cih03030
DNA replication
cih03430
Mismatch repair
cih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATE47_05470
03430 Mismatch repair
ATE47_05470
03440 Homologous recombination
ATE47_05470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cih03032
]
ATE47_05470
03400 DNA repair and recombination proteins [BR:
cih03400
]
ATE47_05470
Enzymes [BR:
cih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ATE47_05470
DNA replication proteins [BR:
cih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ATE47_05470
DNA repair and recombination proteins [BR:
cih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ATE47_05470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
Calici_coat
Motif
Other DBs
NCBI-ProteinID:
ALR30005
LinkDB
All DBs
Position
1199340..1200377
Genome browser
AA seq
345 aa
AA seq
DB search
MKELDLILKSIKNKEVLPIYFFHGEEPYFIDLAVKALEHDFLNEDEKAFNQTVVYGKDTS
YQEILSLARQFPMMGDRQVIIVKEAQDLKLTEPETKALEAYVENPVPSTVLVFAHKHKKL
DSRKKVTKSLDKMKCLFLSESIKENNLPKWIADECIKLSIKTAPNISHLLAEYLGNDLSR
IANELNKLKIILKEGEVLDGTIIENHIGISKEYNVFELQKALGTKNANAAFKIAHFMGKN
PKNNPFVMMLSSLYNYFSNVIIYNTMIGQPPQVIASQMGVNPYFIKDYAESARLYPLKHA
TRVISILREFDMKGKGLGAVNMSEAELIKELVYKIINVDKIKMKV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattagatttaatcctcaaaagtattaaaaataaagaagttttaccgatttat
tttttccatggagaagaaccttactttattgatcttgctgtaaaagcccttgaacacgac
tttttgaatgaagatgaaaaagctttcaatcaaactgtggtttatggaaaagatacgtct
tatcaggaaattctttcgctggcaagacagtttccgatgatgggagacaggcaggtaatt
atcgtaaaagaagctcaggatttaaaattaactgagcccgaaacgaaagcattggaagct
tatgtggaaaatccggtgccatctaccgttctggtttttgcgcataaacacaagaagtta
gacagccggaaaaaggtgacgaaatctttggataagatgaaatgcctttttttaagtgaa
tccatcaaagagaataatcttccgaaatggattgccgacgaatgtattaaactaagcata
aaaacagccccgaatatttcccatttactggcagaatatcttgggaacgacctttccaga
atcgccaatgaactgaataagctgaaaattattcttaaagaaggcgaagttctggatgga
acaattatcgaaaatcacatcgggatcagcaaagaatacaatgtctttgaattacagaag
gctttaggtacaaaaaatgccaatgcagcatttaaaattgctcattttatgggtaaaaat
cctaaaaataatccttttgtaatgatgttgtcgagtttatacaattatttttccaatgtg
attatttataatacgatgatcgggcagcctccacaggttattgcttcccaaatgggtgta
aacccttatttcatcaaagattacgcggaatctgcaagattgtatcctttaaaacatgca
acgagagtaatctctattttaagggaattcgatatgaaaggaaaaggcttgggagcagtc
aatatgagcgaagcggaattgattaaagaactggtttacaagatcattaatgttgataaa
attaagatgaaagtgtaa
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