Chryseobacterium sp. IHB B 17019: ATE47_05560
Help
Entry
ATE47_05560 CDS
T04193
Name
(GenBank) Vi polysaccharide biosynthesis protein VipB/TviC
KO
K02473
UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:
5.1.3.7
5.1.3.-]
Organism
cih
Chryseobacterium sp. IHB B 17019
Pathway
cih00520
Amino sugar and nucleotide sugar metabolism
cih00541
O-Antigen nucleotide sugar biosynthesis
cih01100
Metabolic pathways
cih01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
cih00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
ATE47_05560
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
ATE47_05560
Enzymes [BR:
cih01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.7 UDP-N-acetylglucosamine 4-epimerase
ATE47_05560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
NAD_binding_10
RmlD_sub_bind
NAD_binding_4
NmrA
adh_short
3HCDH_N
adh_short_C2
KR
Motif
Other DBs
NCBI-ProteinID:
ALR30021
LinkDB
All DBs
Position
1217422..1218390
Genome browser
AA seq
322 aa
AA seq
DB search
MHKILITGGAGFIGSNLTEYFLNKGYDVVCLDNFATGHRHNIEPFLENPNYKLIEGDICD
LETCRKAVENVDYVLHQAALGSVPRSIKDPITSNGVNVSGFLNMLVAARDANVKRFIYAA
SSSTYGDSASLPKVEDVIGKPLSPYAITKYVNELYADVFGKTYGMECIGLRYFNVFGRRQ
DPNGAYAAVIPLFIKQLINHESPKINGTGDYSRDFTYIDNVIQMNELAMLTDNPEAVNTV
YNTAVGDRTTLNDLIKYLKQYLSEFDQEIANIDAVHGPNRVGDIPHSLASVEKAEKLLGY
KPSHTIEQGLKEAISWYWENLK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcataaaattttaattacaggaggagcaggttttatcggttccaacctgacagagtat
tttttgaataaaggctatgatgttgtctgtctggataattttgccacaggacaccgtcat
aatatcgagcctttccttgaaaatcccaattataaattaattgaaggcgatatctgtgat
ttggaaacttgcaggaaagcggtggaaaatgtagactatgtcctgcatcaggcagcatta
ggttctgttccgaggtccattaaagatcctatcacaagcaatggagtgaatgtttcaggc
tttttgaatatgctggttgccgctcgtgacgcgaatgttaaacgtttcatttatgccgct
tcatcatcaacgtacggtgattctgcatcgttgccgaaagtggaagacgtaatcgggaaa
ccattgtcaccgtatgccattacgaaatatgtaaatgagctatacgctgatgtattcggg
aaaacttacggcatggaatgtattggtttaagatatttcaatgtattcgggcgcagacag
gatcccaacggagcttatgcggctgtaattcctttatttatcaagcaattaatcaatcat
gaatcccctaaaattaatggtacgggagattactcacgtgatttcacttacattgataat
gttatccagatgaatgaattagccatgcttactgacaatcctgaagcggtgaatacagtg
tacaacacggctgtgggagatcgtacaacattaaatgatttaattaaatatcttaaacaa
tatttaagtgaattcgatcaggaaattgccaatatcgatgctgttcacggcccgaatcgt
gtcggtgacatcccgcactccctggcttccgtagaaaaagcagaaaaactattaggatac
aaaccatctcataccattgaacaagggctgaaagaagccatcagctggtattgggaaaat
ttaaaataa
DBGET
integrated database retrieval system
