Chryseobacterium sp. IHB B 17019: ATE47_07840
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Entry
ATE47_07840 CDS
T04193
Name
(GenBank) ABC-ATPase UvrA
KO
K03701
excinuclease ABC subunit A
Organism
cih
Chryseobacterium sp. IHB B 17019
Pathway
cih03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ATE47_07840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cih03400
]
ATE47_07840
DNA repair and recombination proteins [BR:
cih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATE47_07840
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ATE47_07840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
SMC_N
UvrA_DNA-bind
nSTAND1
AAA_29
AAA_16
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
AAA_21
AAA_25
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
ALR30443
LinkDB
All DBs
Position
complement(1701251..1704082)
Genome browser
AA seq
943 aa
AA seq
DB search
MSKSTEYIEVYGAREHNLKNINVKIPRNELVVITGLSGSGKSSLAFDTIFAEGQRRYIET
FSAYARQFLGGLERPDVDKIEGLSPVIAIEQKTTNKNPRSTVGTVTELYDYLRLLYARVS
DAYSLTTGKRLVSYTEEQILDAIKENYKGEKIMLLAPVVRSRKGHYHELFVQMAKKGYGQ
ARIDGELQDIEYDLKLDRYKTHDIDIVIDRWIIGESASEGRMEKSLRTAMEMGEGIIGIQ
KLNGTEIEYFSKNLMDAETGHSLALPEPNTFSFNSPKGSCPNCKGLGTIKKINTDYFVEN
PKLSINQGGLLPLEDIKSNKWILSQIKNILEIFGLGFATPMKDIPAEALDYIYNGCHKEF
NKDLKYAGIAKKIKISFDGLIPFMEELIEERESYEAILLERHFTTEETCPECKGARLQPG
SLSFKIDGKNIAEVNGLSLSDLKEWLADIKDKFSEKNSIIAHEILKEIETRLQFLLDVGL
DYLSLSRSSKTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLINSLKNLR
DIGNSVLVVEHDKDMILEADEVLDIGPRAGKFGGEILWQGKPKDLLKADTITAQYINGKR
KIEVPAERRKGNGKNILLKGATGNNLKNVTLDIPLGKLVVVTGISGSGKSSLINGTLYPI
LNKHFYRAVQEPLPYKKIEGLDNIDKIVDVDQTPIGRTPRSNPATYTGMFTDIRNLFAEL
PESKIRGYKPGRFSFNVKGGRCETCQGGGLKVIEMNFLPDVYVHCETCNGKRFNRETLEV
RYKGKSISDVLEMTIDEAVEFFQPIPKIYSRVKTLHDVGLGYITLGQQSTTLSGGEAQRI
KLATELAKRQTGNTLYILDEPTTGLHFEDVKILMEAINKLVELGNSFIIIEHNMDVIKLA
DYIIDVGPEGGKHGGQIVAQGTPEEIVKSKKSLTGKFLKRELE
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatcaacagaatatatagaagtttacggcgcacgtgagcataatcttaaaaac
attaacgtaaaaattccgcgcaatgaattggtcgtgattaccgggctttcgggaagcgga
aaatcgtcattggcttttgatacgatttttgcggaaggacagcgtcgttatattgaaaca
ttttcagcgtatgcacgccagtttttgggagggttggaacgtccggatgtagataaaatc
gaaggactttcacccgtaattgcaatcgaacaaaaaactacgaataaaaatccacgttca
actgtaggtaccgtaacagaattatacgattatctgcgtctgttgtacgccagagtttcc
gatgcctattccttaacgacgggaaaaagattggtaagctataccgaagagcagatcctt
gacgctatcaaagaaaattataaaggcgagaaaataatgctgttggcgccggttgtgcgt
tccagaaaaggacattatcatgagctttttgttcagatggcaaaaaaaggatacggacag
gcaagaatagacggtgaattgcaggatattgaatatgatttaaagcttgaccgttacaaa
acccatgacattgatattgtcatcgaccgttggatcattggggaaagcgcgtctgaaggc
agaatggagaaatcgctcagaacggcaatggaaatgggtgaaggaattatcgggattcag
aagctgaacggaacagaaatagaatatttttctaaaaatctgatggatgcagaaacagga
cattcattagcgttaccggagccgaatactttttcgtttaattccccgaaaggaagctgc
ccgaattgtaaaggattgggaaccatcaaaaaaatcaatactgattattttgttgaaaat
ccgaaattgtcaatcaatcagggaggtttgttgccgctggaagacattaaatcaaataaa
tggatcttatctcagattaaaaatatccttgaaatcttcgggttaggttttgctactcca
atgaaggatattcctgcagaagcattagactatatttacaacggttgccataaagaattt
aataaagatttaaaatacgctggaatcgccaaaaaaattaaaataagttttgatggttta
attcctttcatggaagaactgattgaagaaagagaatcctacgaagctattttgctagaa
agacatttcacaacagaagaaacctgccctgaatgtaaaggtgcccgtcttcaaccggga
agcttaagttttaaaattgacggaaagaatattgcagaggtcaacggtttaagcttatct
gatttaaaggaatggttagctgatattaaagataaattttcagaaaaaaattcgatcatc
gctcatgagattttaaaagaaatcgaaacaaggcttcagttcttattggatgtcggttta
gattatttaagcctgagcagaagttcaaaaaccctttccggaggggaatctcagagaatc
cgtctggcgacacaaattggttctcagttggtgaatgtcttgtatattctggatgaacca
agcatcgggcttcaccaaagagacaatgaaagattgattaattcattaaaaaatcttcgt
gatatcggaaactctgtgttggtggtagaacacgataaagatatgatcctggaagccgat
gaggtgttggatattggcccgagagccggaaaattcgggggagagatcctttggcaggga
aaaccaaaagatctattgaaagccgataccattactgctcaatatatcaacggaaaaaga
aaaattgaagttcctgcggaaagacgtaaaggaaacggtaaaaatatattgttaaaagga
gctacaggaaataatcttaaaaacgtaaccctcgatattcctcttggaaaactggtcgta
gtaaccgggatttccggaagcggaaaatcttctttgataaacggaaccttatacccgatt
cttaataaacacttctacagagccgttcaggagcctttgccatacaaaaaaatcgaaggt
cttgataatatagataagattgtagatgtagatcagaccccgatcggtagaaccccacgt
tcaaaccctgcaacatacaccggaatgtttacagatatcagaaatctttttgcggaactg
ccggaaagtaaaatccgtggttacaagcccggaagattttctttcaacgtaaaaggtgga
agatgtgaaacctgtcagggaggtggtttgaaggtgattgaaatgaacttcttaccggac
gtttatgttcattgtgaaacctgcaatggaaaacgtttcaacagggaaacgctggaagtt
cgatacaaaggaaaatcaatttcagacgtgttggaaatgaccattgatgaggcggtagaa
tttttccagccgattcctaaaatttattccagggtaaaaactttacatgatgttgggttg
ggatatattaccttgggacagcagtctacaacactttcaggaggtgaagcccagcgtatc
aagttggcaacggaacttgcaaaaagacagacaggaaataccttatatattcttgacgaa
cctacaaccggacttcattttgaagatgtgaaaatcctgatggaagctattaataaactg
gtggagttaggaaattcatttattattattgaacataatatggatgtcattaagcttgcc
gattatattatagacgttggtccggaaggtggaaaacacggcggacagattgttgcacaa
ggaactccggaggaaattgtgaaatcaaaaaagagtttgacagggaagtttttaaagagg
gaattggagtaa
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