Chryseobacterium sp. IHB B 17019: ATE47_09860
Help
Entry
ATE47_09860 CDS
T04193
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cih
Chryseobacterium sp. IHB B 17019
Brite
KEGG Orthology (KO) [BR:
cih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cih03400
]
ATE47_09860
DNA repair and recombination proteins [BR:
cih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ATE47_09860
Archaeal homologous recombinant proteins
ATE47_09860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
AAA_27
ABC_tran
AAA_29
SbcC_Walker_B
DUF8594
Motif
Other DBs
NCBI-ProteinID:
ALR30812
LinkDB
All DBs
Position
complement(2135877..2138207)
Genome browser
AA seq
776 aa
AA seq
DB search
MKYRISELKIKNFKCFTDVNFDFGGDNLVVFDGPNGYGKTTSFEALEILLTKAPRKIGKA
KLDKRYTYENSPIHKFEDKEIEISVQLVSSDSNHIKVKRVFPAATNGKSKKNNISQIYSD
SKLFINDEEVSSESSLEDVLDYKNVYNLFNVLNYVEQDENTYFLKEDPKERYKALVSLLG
GDEERILLEKVESFHLKLKLKVEQIQSSINDLKQNNSDLLKNQFDEISYKKLIDNSLNDF
VWDNEVIKNTDINLHNSYLNEINKIENLFNNRQIVGEIVLLDKINKYRNDIVFIDSFINS
YWSVQNYNILEDENNRKNNNKKTIETNNKILQYIDSNDYNQLLSGENILFLSEKEKIKNE
VEVFKVSLKLLLTLRESLSLQNQILSDLKDKRESLIILNRNHKDFIDLKEGECPVCGYDW
QSNEKLIQQIEETESKIFKQYNEDNSKFEKQKEDLNKRYLESFKTFIIEENESLETELSK
LVDFDFFSRLKDLYTSYKSRFETFLSLFNEEVRKQINSMVNLRNIENKNLIKNNILELID
KEKPVVETDLSFDEIITDFNLYFNNDAEKLNKLSLEEIKQKRNYIEYQYFNSVNVGINNL
EERKLKLYGLQQEYDEVRKKLDEKIKNYTKSIIEKISIPFYIYTGKILQNHSLGSGLVID
FEMKRGDSQIYIRPTHRDQEVTYTLSSGQLSATVISLMLVLNKVFNHSKFGTLLIDDPLQ
TLDEINSHSLVELLKHNFSEQQIIISTHEDRYSKFIRYKYDKFNLYSRSIRMKEVI
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatagaatttcagaattaaaaattaaaaactttaaatgttttactgatgtaaac
tttgattttggtggtgataatttagttgtatttgatggtccaaatggatatggaaaaacg
acttcatttgaagctcttgaaattctattaactaaagctccgcgaaagataggtaaagca
aagttagataaaagatatacttacgaaaatagcccaatacataaatttgaggataaggag
atagagatttcagtacaattagtatcttctgatagtaatcatatcaaagtaaaaagagtt
tttccagctgcaaccaatggaaagtcaaagaaaaataatataagtcagatatattctgat
tctaaattatttatcaatgatgaggaagttagctcggaaagtagtttagaagatgtttta
gattacaaaaatgtatacaacttatttaatgtattaaactatgttgaacaggatgagaat
acatattttttaaaagaagatccaaaagaaaggtataaagcattagtatctcttttagga
ggtgatgaagaaaggatattattagaaaaagttgaaagttttcatttaaaactgaaacta
aaagtcgaacaaattcaatcttcgattaatgatttaaaacagaataattcagatttatta
aaaaatcagtttgacgaaatttcttataaaaaactaattgataatagtctgaatgatttt
gtgtgggataatgaagttattaaaaatactgatattaatcttcataattcatatttgaac
gaaataaataaaattgagaacctatttaataatagacaaattgttggagaaatagtttta
ttagataaaataaataaatatagaaacgatattgtttttatagattcatttattaatagt
tattggagtgtacagaactataatattttagaggatgagaataatagaaaaaacaataat
aaaaaaactattgaaactaataataaaattcttcagtatatagatagtaatgattataat
caattattaagtggagaaaatattttgtttttatctgaaaaggagaaaataaaaaatgaa
gtggaggtttttaaggttagtttaaaactacttttaacattacgtgagagtttatcactt
cagaatcaaatattatctgacttaaaggataaaagagaatctttgattattttaaataga
aaccataaagattttatcgatttaaaagagggagaatgtcctgtttgcggatatgattgg
caaagtaatgagaaattgatacaacagatagaagaaacagaatcaaaaatatttaaacaa
tataatgaagataactctaagtttgaaaaacagaaagaggatttgaataaaagatattta
gaaagttttaaaacgttcattattgaagagaatgaatctttagaaaccgaattatcaaaa
ttagtagattttgattttttctcacgtttaaaggatctttatacctcttacaaaagtcgt
tttgaaacttttttatcattgtttaatgaggaagtgaggaaacaaataaattcaatggtt
aatttaaggaacattgaaaacaaaaatttgattaaaaacaatattttagagttaatagat
aaagaaaaacccgtagttgaaactgatttaagctttgatgaaattattacggattttaat
ctttatttcaataacgatgcggaaaagctgaataagttatctttagaagaaataaaacaa
aaaagaaattatattgaataccaatattttaattctgtaaatgtgggtattaataattta
gaagaaagaaaactaaaattatatggattacaacaggaatatgacgaagtaagaaaaaag
ttagatgaaaaaattaagaattatacaaaaagtatcattgaaaaaattagtattcctttt
tacatctatacaggaaaaatattacaaaatcatagtttaggctcagggttagtaatagat
tttgaaatgaaaagaggagattctcaaatttatataagaccaacacatagagatcaagag
gtaacttatacattaagttcaggacaattgtctgcaacagttatatcattgatgttggta
ttaaataaagtatttaatcattctaaatttggaacgttattaattgatgatccattacaa
actttagatgaaattaattcacattcactggtagagttgttaaaacataatttttcagaa
caacaaattatcatctctactcacgaagacagatattcaaaatttattcgatataaatat
gataaatttaatttatatagcagaagtataaggatgaaagaagtaatatag
DBGET
integrated database retrieval system
