Chryseobacterium sp. IHB B 17019: ATE47_09925
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Entry
ATE47_09925 CDS
T04193
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cih
Chryseobacterium sp. IHB B 17019
Brite
KEGG Orthology (KO) [BR:
cih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cih03032
]
ATE47_09925
03400 DNA repair and recombination proteins [BR:
cih03400
]
ATE47_09925
Enzymes [BR:
cih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ATE47_09925
DNA replication proteins [BR:
cih03032
]
Prokaryotic type
DNA Topoisomerases
ATE47_09925
DNA repair and recombination proteins [BR:
cih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ATE47_09925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ALR30825
LinkDB
All DBs
Position
2151901..2153004
Genome browser
AA seq
367 aa
AA seq
DB search
MENSDLEIISHLKPSKIVKIMKDPEASAKAVHLIYTSDAETAGITRKKTGKKYSYYKDGK
KIKDKDEIARINKLVIPPAWENVWICALDNGHLQATGFDLKKRKQYRYHPLWSALRNHTK
FYRMLQFGYALPNIRLQIEQDLALRNFEKRKILALIVSLMQRTNIRIGNNAYEKLYGSFG
LTTLKDKHVKINGQKITFHFKGKKGIMHDIDLKSKRLSRLVQKCKDIPGKELFQYYDDEG
NRHSVDSGMVNEYIKEISGEDFTAKDFRTWSGTVSALIAFKEIGYAETHTEYKKKVKEAL
EIVASHLGNTSTVCRKYYVHPLVINLYENNSIKKYLDELEKIEENDGKAGLTQEEKLVLK
ILENEKM
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattcagacttagaaattatttcccatctgaaaccttcaaagattgtcaagatt
atgaaagatccggaggcttctgcaaaggcggtacatcttatttatacctccgatgcagaa
acggccggtatcactcgtaagaaaaccggaaaaaagtattcttattacaaagacggcaaa
aaaatcaaagacaaagacgagatcgcaagaatcaacaaactggtcattccgccggcttgg
gaaaacgtatggatatgcgctttggataatggacatcttcaggccacaggatttgacctt
aaaaaaagaaaacagtaccggtatcatcctctatggagtgctttgagaaatcacacaaaa
ttctacagaatgcttcagttcgggtatgcacttcccaatatccggcttcagatagaacaa
gatcttgccttaagaaatttcgaaaagagaaaaattttagccttaattgtcagtttaatg
caaagaaccaatatcagaatcggaaataacgcttacgaaaaattgtacggttcttttgga
ttaaccactttaaaggataagcatgtaaaaatcaacggacagaaaattacttttcatttt
aaaggtaaaaaaggaatcatgcatgatattgatcttaaaagtaaaagactgtccagactg
gtgcaaaaatgtaaggatattcccggaaaagagcttttccaatattatgatgatgaaggg
aaccgtcattcggtagattccgggatggtgaatgaatatattaaggaaataagcggggaa
gattttacggccaaagatttcaggacgtggtccggaacggtaagtgctttaatcgctttt
aaagaaatcggctatgcggaaacccatacggaatataagaaaaaggtaaaagaagcactg
gaaattgttgcttcccatctcggaaataccagcacggtctgcagaaaatattacgtgcat
cctttagttattaatctctatgaaaataattctatcaaaaaatatcttgatgaattagaa
aaaatagaggaaaatgatggcaaagcaggccttactcaggaagaaaaactggtattgaaa
attttggaaaacgagaaaatgtag
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