Chryseobacterium sp. IHB B 17019: ATE47_11235
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Entry
ATE47_11235 CDS
T04193
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cih
Chryseobacterium sp. IHB B 17019
Brite
KEGG Orthology (KO) [BR:
cih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cih03009
]
ATE47_11235
Enzymes [BR:
cih01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ATE47_11235
Ribosome biogenesis [BR:
cih03009
]
Prokaryotic type
ribosomal protein modification factors
ATE47_11235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ALR31062
LinkDB
All DBs
Position
complement(2435308..2436609)
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AA seq
433 aa
AA seq
DB search
MRTKSVGKKKINVVTLGCSKNVYDSEVLMSQLKANGKEVVHEDKGDIVVINTCGFIDNAK
EESINTILDYVEAKNRGEVEKVFVTGCLSERYKPDLIREIPDVDQYFGTRDLPILLKHLG
ADYKHELVGERLTTTPKHYAYLKISEGCDRPCSFCAIPLMRGGHMSTPIEKLVTEAQKLA
KKGTKELILIAQDLTYYGLDLYKKRALGDLLKELVKVDGIEWIRLHYAFPSGFPEDVLDI
IREEPKVCNYIDIPLQHINSDLLKSMKRGTTHEKTDALLAKFREKVPDMAIRTTLIVGYP
GETEERFQELKDWVREQKFDRLGCFTYSHEENTSAYVLQDDIPQEVKEARVEEIMELQSQ
ISWEKNQEKIGKIYKCIFDRKEGNYFVGRTEYDSPDVDNTVLVSAENTYISIGDFAEVKI
TSAEEFDLYGELI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacaaaatctgtaggtaagaagaaaattaatgtagtaacgcttggatgttccaag
aacgtttatgattccgaagtcttgatgagccagcttaaagccaatggtaaagaagttgtt
catgaagacaagggagatattgttgtaatcaatacctgcggatttattgataatgcaaaa
gaagaatccatcaatacaattctggattatgtagaagctaaaaatagaggagaggtagaa
aaagttttcgttacaggctgtctttctgaaagatacaagccggatttgataagagaaatt
ccggatgtagatcaatatttcggaacaagagaccttccgattttattaaaacatttggga
gcagattataagcacgaattggttggagaaagattaacaactactccaaaacactatgct
tacctaaaaatatctgaaggttgcgacagaccgtgctctttttgtgcaatcccgttaatg
cgtggaggccatatgtccacaccaattgagaaattggttaccgaagcccaaaaattagcc
aaaaaaggaacaaaagaattgattttgattgctcaggaccttacctattacggattagac
ctttataaaaaaagagcgttgggtgatttattaaaagaattggtgaaagttgatggtatc
gaatggattcgccttcattatgctttcccaagcgggtttccggaggacgttctggatatt
atccgtgaggagcctaaggtttgcaattatatagatattccacttcagcatatcaattcg
gatttattaaaatcaatgaagaggggaacaactcatgaaaaaactgatgctcttttggcc
aaattcagagaaaaagttccggatatggctatcagaacaacccttattgttggttatccc
ggagaaacagaggagagattccaggaattaaaagactgggtgagagagcaaaaatttgac
agattagggtgtttcacttactctcatgaagagaatacttccgcttatgttttgcaggat
gatattccacaggaagttaaagaagccagagtagaagagattatggagcttcagtctcaa
atttcatgggagaaaaaccaggagaaaattggtaaaatatataaatgtatttttgacaga
aaagaagggaactattttgttggaagaacggaatatgattcacctgatgttgataataca
gttttagtatcggcagaaaatacctacatttctattggtgattttgcagaggtaaaaata
acatcggcagaggaatttgacctgtatggtgaattgatttaa
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